| Protein: | gi|29824147, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 520 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29824147, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..1] | [438..1] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV 60
61 QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE LHAKMGNRWA RMAAHLPGRT 120
121 DNEIKNYWNT RIKRRQRAG
|
| Detection Method: |  |
| Confidence: | 54.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [140-331] |
1 11 21 31 41 51
| | | | | |
1 LPLYPPEMHV EALEWSQEYA KSRVMGEDRR HQDFLQLGSC ESNVFFDTLN FTDMVPGTFD 60
61 LADMTAYKNM GNCASSPRYE NFMTPTIPSS KRLWESELLY PGCSSTIKQE FSSPEQFRNT 120
121 SPQTISKTCS FSVPCDVEHP LYGNRHSPVM IPDSHTPTDG IVPYSKPLYG AVKLELPSFQ 180
181 YSETTFDQWK KS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [332-520] |
1 11 21 31 41 51
| | | | | |
1 SSPPHSDLLD PFDTYIQSPP PPTGGEESDL YSNFDTGLLD MLLLEAKIRN NSTKNNLYRS 60
61 CASTIPSADL GQVTVSQTKS EEFDNSLKSF LVHSEMSTQN ADETPPRQRE KKRKPLLDIT 120
121 RPDVLLASSW LDHGLGIVKE TGSMSDALAV LLGDDIGNDY MNMSVGASSG VGSCSWSNMP 180
181 PVCQMTELP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
