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Protein Overview: EHD1_ARATH

General Information:
Name(s) found: EHD1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • EH domain-containing protein 1 OS=Arabidopsis thaliana GN=EHD1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: endosome [IDA]
    cytoplasm [IDA]
    membrane [IDA]
    microsome [IDA]
    Biological Process: endocytosis [IMP]
    Molecular Function: GTP binding [IEA]
    calcium ion binding [IEA][ISS]
    GTPase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA  60
   61 DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF KNINPPTMEG LGVLMAKKKH 120
  121 SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR 180
  181 FNDFVSPLLT NSDFDAKPMV MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM 240
  241 SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE 300
  301 KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA 360
  361 DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP INEAATGPIG RELFEKEQDD 420
  421 LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED 480
  481 EFGKVQREHH LPKGDFPNVD HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF 540
  541 KNPYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] PSI-BLAST 19.30103 CALMODULIN, NMR, 30 STRUCTURES
    2 View Details [153..545] PSI-BLAST 65.09691 No description for 2qptA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • calcium ion binding
    		•  2.10993417016231 bayes_pls_golite062009
  • binding
    		•  1.38572474078647 bayes_pls_golite062009
  • cation binding
    		•  1.32146266431825 bayes_pls_golite062009
  • metal ion binding
    		•  1.32146266431825 bayes_pls_golite062009
  • ion binding
    		•  1.31242124126239 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.539550637107889 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.49944935937406 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.486374653947972 bayes_pls_golite062009
  • protein binding
    		•  0.124994709840647 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.0724768101463518 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle