| Protein: | EHD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EHD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
315.0 | [0..12] | [545..7] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA 60
61 DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF KNINPPTMEG LGVLMAKKKH 120
121 SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KI
|
| Detection Method: |  |
| Confidence: | 19.30103 |
| Match: | 1dmoA |
| Description: | CALMODULIN, NMR, 30 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| calcium ion binding | 2.10993417016231 | bayes_pls_golite062009 |
| binding | 1.38572474078647 | bayes_pls_golite062009 |
| cation binding | 1.32146266431825 | bayes_pls_golite062009 |
| metal ion binding | 1.32146266431825 | bayes_pls_golite062009 |
| ion binding | 1.31242124126239 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.539550637107889 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.49944935937406 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.486374653947972 | bayes_pls_golite062009 |
| protein binding | 0.124994709840647 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0724768101463518 | bayes_pls_golite062009 |
|
Region A: Residues: [153-545] |
1 11 21 31 41 51
| | | | | |
1 SLSSVTSIVD GLKRLYIQKL KPLEVAYRFN DFVSPLLTNS DFDAKPMVML LGQYSTGKTT 60
61 FIKHLLKSTY PGAHIGPEPT TDRFVVVMSG PDERSIPGNT VAVQADMPFS GLTTFGTAFL 120
121 SKFECSQMPH PLLEHVTFVD TPGVLSGEKQ RTQRAYDFTG VTSWFASKCD LILLLFDPHK 180
181 LDVSDEFKRV ISSLRGHDDK IRVVLNKADQ VDTQQLMRVY GALMWSLGKV LNTPEVSRVY 240
241 IGSFSDKPIN EAATGPIGRE LFEKEQDDLL ADLKDIPKKA CDRRINEFVK RARAAKIHAY 300
301 IISHLKKEMP AIMGKAKAQQ KLIDNLEDEF GKVQREHHLP KGDFPNVDHF REVLSGYNID 360
361 KFEKLKPKML QTVDDMLGYD IPELLKNFKN PYD
|
| Detection Method: | |
| Confidence: | 65.09691 |
| Match: | 2qptA |
| Description: | No description for 2qptA was found. |
