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Protein Overview: gi|254038967, gi...

General Information:
Name(s) found: gi|254038967 [NCBI NR]
gi|226838932 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|254038967|ref|ZP_04873019.1| RbsP [Escherichia sp. 1_1_43] [NCBI NR]
  • gi|226838932|gb|EEH70959.1| RbsP [Escherichia sp. 1_1_43] [NCBI NR]
    • Organism: Escherichia sp. 1_1_43
    Length: 151 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQRNVSLME KKMKKGTVLN SDISSVISRL GHTDTLVVCD AGLPIPKSTT RIDMALTQGV  60
   61 PSFMQVLGVV TNEMQVEAAI IAEEIKHHNP QLHETLLTHL EQLQKHQGNT IEIRYTTHEQ 120
  121 FKQQTAESQA VIRSGECSPY ANIILCAGVT F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] PSI-BLAST 42.045757 The Structure of Bacillus subtilis RbsD complexed with D-ribose

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pentose transmembrane transporter activity
    		•  6.2485042058013 bayes_pls_golite062009
  • D-ribose transmembrane transporter activity
    		•  6.2485042058013 bayes_pls_golite062009
  • D-ribose-importing ATPase activity
    		•  6.2485042058013 bayes_pls_golite062009
  • monosaccharide-transporting ATPase activity
    		•  6.16163580465116 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  3.61697726040789 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  3.59380400317869 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  3.23077986789563 bayes_pls_golite062009
  • carbohydrate-transporting ATPase activity
    		•  2.96143396897618 bayes_pls_golite062009
  • carbohydrate-importing ATPase activity
    		•  2.94131146279507 bayes_pls_golite062009
  • catalytic activity
    		•  1.27293510281823 bayes_pls_golite062009
  • transporter activity
    		•  1.01746735264675 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.87756239772218 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.72784177997322 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.66323199697211 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.65947047335315 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.65175782581698 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.65175782581698 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.65128875691509 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.58773761631758 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.45644371872865 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.39893464292583 bayes_pls_golite062009
  • hydrolase activity
    		•  0.39195211650109 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.30534945021792 bayes_pls_golite062009
  • ATPase activity
    		•  0.29975321704305 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.27836523364225 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.27156652952534 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.27078585439886 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle