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Protein Overview: PGL1B_ARATH

General Information:
Name(s) found: PGL1B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75151402|sp|Q8GYC7.1|PGL1B_ARATH RecName: Full=PGR5-like protein 1B, chloroplastic; Flags: Precursor [NCBI NR]
  • gi|42566515|ref|NP_192933.2| PGRL1B (PGR5-Like B) [Arabidopsis thaliana] [NCBI NR]
  • gi|28950891|gb|AAO63369.1| At4g11960 [Arabidopsis thaliana] [NCBI NR]
  • gi|26450517|dbj|BAC42372.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana GN=PGRL1B PE=1 SV=1 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|28950891|gb|AAO63369.1| At4g11960 [Arabidopsis thaliana]gi|42566515|ref|NP_192933.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein, hypothetical protein F7H19.70 - Arabidopsis thaliana, PID:e1310057 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PGRL1B | PGRL1B (PGR5-LIKE B) | chr4:7175334-7177703 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g11960 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PGRL1B | PGR5-like B | chr4:7175340-7177709 REVERSE LENGTH=313 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 313 amino acids

    Gene Ontology:
    Cellular Component: chloroplast thylakoid membrane [IDA]
    Biological Process: photosynthesis [IGI]
    photosynthetic electron transport in photosystem I [IGI]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTLTIPRF SAISRKPITC SSSRTQCPAP FTHGRSISLR RRLTLLPLKA STDQSGQVGG  60
   61 EEVDSKILPY CSINKNEKRT IGEMEQEFLQ AMQSFYYEGK AIMSNEEFDN LKEELMWEGS 120
  121 SVVMLSSDEQ RFLEASMAYV SGNPILSDEE YDKLKMKLKM DGSEIVCEGP RCSLRSKKVY 180
  181 SDLAIDYFKM FLLNVPATVV ALGLFFFLDD ITGFEITYLL ELPEPFSFIF TWFAAVPAIV 240
  241 YLALSLTKLI LKDFLILKGP CPNCGTENVS FFGTILSIPN DSNTNNVKCS GCGTEMVYDS 300
  301 GSRLITLPEG GKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] MSA 1.005948 View MSA. No confident structure predictions are available.
    2 View Details [120..313] MSA 3.007966 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle