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Protein Overview: gi|26450464, gi|...

General Information:
Name(s) found: gi|26450464 [NCBI NR]
gi|19699359 [NCBI NR]
gi|18412482 [NCBI NR]
gi|115646741 [NCBI NR]
Description(s) found:
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  • gi|26450464|dbj|BAC42346.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19699359|gb|AAL91289.1| At1g79720/F19K16_30 [Arabidopsis thaliana] [NCBI NR]
  • gi|18412482|ref|NP_565219.1| aspartyl protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|115646741|gb|ABJ17101.1| At1g79720 [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|19699359|gb|AAL91289.1| At1g79720/F19K16_30 [Arabidopsis thaliana]gi|18412482|ref|NP_565219.1| aspartyl protease family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aspartyl protease family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aspartyl protease family protein | chr1:30002152-30003844 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • pepsin A [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g79720/F19K16_30 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g79720 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Eukaryotic aspartyl protease family protein | chr1:29997259-29998951 REVERSE LENGTH=484 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Aspartyl protease-like protein OS=Arabidopsis thaliana GN=At1g79720/F19K16_30 PE=2 SV=1 [ARATH-contam.fasta]
  • At1g79720 OS=Arabidopsis thaliana GN=At1g79720 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 484 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IDA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: aspartic-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG  60
   61 KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS LQLKIKAMTS STTEQSVSET 120
  121 QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS 180
  181 SSYKTVFCNS STCQDLVAAT SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL 240
  241 GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS 300
  301 GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS 360
  361 GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN LTSYEDISIP IIKMIFQGNA 420
  421 ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE 480
  481 NCRV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] PSI-BLAST 70.221849 REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.01508543827677 bayes_pls_golite062009
  • hydrolase activity
    		•  0.77554493777157 bayes_pls_golite062009
  • peptidase activity
    		•  0.68518523369811 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.43925265235199 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.43264884039584 bayes_pls_golite062009
  • aspartic-type endopeptidase activity
    		•  0.30585066730542 bayes_pls_golite062009
  • aspartic-type peptidase activity
    		•  0.30585066730542 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle