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Protein Overview: gi|18390936, gi|...

General Information:
Name(s) found: gi|42571407 [NCBI NR]
gi|30680805 [NCBI NR]
gi|26450273 [NCBI NR]
gi|18390936 [NCBI NR]
Description(s) found:
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  • gi|42571407|ref|NP_973794.1| GPI-anchor transamidase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|30680805|ref|NP_849616.1| GPI-anchor transamidase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|26450273|dbj|BAC42253.1| putative GPI-anchor transamidase [Arabidopsis thaliana] [NCBI NR]
  • gi|18390936|ref|NP_563825.1| GPI-anchor transamidase, putative [Arabidopsis thaliana] [NCBI NR]
  • putative GPI-anchor transamidase [Arabidopsis thaliana]gi|30680805|ref|NP_849616.1| GPI-anchor transamidase, putative [Arabidopsis thaliana]gi|42571407|ref|NP_973794.1| GPI-anchor transamidase, putative [Arabidopsis thaliana]gi|18390936|ref|NP_563825.1 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 GPI-anchor transamidase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | GPI-anchor transamidase, putative | chr1:2801286-2804395 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • GPI-anchor transamidase/ cysteine-type endopeptidase/ legumain [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative GPI-anchor transamidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Peptidase C13 family | chr1:2801283-2804392 FORWARD LENGTH=388 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Peptidase C13-like protein OS=Arabidopsis thaliana GN=At1g08750/F22O13_24 PE=2 SV=1 [ARATH-contam.fasta]
  • Peptidase C13-like protein OS=Arabidopsis thaliana GN=At1g08750 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: proteolysis [IEA][ISS]
    Molecular Function: GPI-anchor transamidase activity [ISS]
    cysteine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILTLVMLL CYSFVSSTGD TTIHTNNWAV LVCTSRFWFN YRHMANTLSL YRTVKRLGIP  60
   61 DERIILMLAD DMACNARNEY PAQVFNNENH KLNLYGDNVE VDYRGYEVTV ENFLRVLTGR 120
  121 HENAVPRSKR LLSDEGSHIL LYMTGHGGDE FLKFQDAEEL QSHDLADAVK QMKEKRRFKE 180
  181 LMIMVDTCQA ATLFNQLQSP GVLAIGSSLK GENSYSHHLD SDIGVSVVDR FTYYTLAFFE 240
  241 RLNIYDNASL NSLFRSYDPR LLMSTAYYRT DLYQPHLVEV PVTNFFGSVM ETIHTDSAYK 300
  301 AFSSKISERK INSEMPFNQL SEHDLKEELE NTNIPNDELI AEKQKCPYSQ MRADLHEKVE 360
  361 KLENVDTVVN LSIAVMVLAV MVSSSLLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] FFAS03 2.11 Caspase-8
    2 View Details [290..388] MSA 4.084994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle