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Protein Overview: gi|238901749, gi...

General Information:
Name(s) found: gi|238901749 [NCBI NR]
gi|238861220 [NCBI NR]
Description(s) found:
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  • gi|238901749|ref|YP_002927545.1| fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BW2952] [NCBI NR]
  • gi|238861220|gb|ACR63218.1| fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit [Escherichia coli BW2952] [NCBI NR]
    • Organism: Escherichia coli BW2952
    Length: 886 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQRGLEALL RPKSIAVIGA SMKPNRAGYL MMRNLLAGGF NGPVLPVTPA WKAVLGVLAW  60
   61 PDIASLPFTP DLAVLCTNAS RNLALLEELG EKGCKTCIIL SAPASQHEDL RACALRHNMR 120
  121 LLGPNSLGLL APWQGLNASF SPVPIKRGKL AFISQSAAVS NTILDWAQQR KMGFSYFIAL 180
  181 GDSLDIDVDE LLDYLARDSK TSAILLYLEQ LSDARRFVSA ARSASRNKPI LVIKSGRSPA 240
  241 AQRLLNTTAG MDPAWDAAIQ RAGLLRVQDT HELFSAVETL SHMRPLRGDR LMIISNGAAP 300
  301 AALALDALWS RNGKLATLSE ETCQKLRDAL PEHVAISNPL DLRDDASSEH YIKTLDILLH 360
  361 SQDFDALMVI HSPSAAAPAT ESAQVLIEAV KHHPRSKYVS LLTNWCGEHS SQEARRLFSE 420
  421 AGLPTYRTPE GTITAFMHMV EYRRNQKQLR ETPALPSNLT SNTAEAHLLL QQAIAEGATS 480
  481 LDTHEVQPIL QAYGMNTLPT WIASDSTEAV HIAEQIGYPV ALKLRSPDIP HKSEVQGVML 540
  541 YLRTANEVQQ AANAIFDRVK MAWPQARVHG LLVQSMANRA GAQELRVVVE HDPVFGPLIM 600
  601 LGEGGVEWRP EDQAVVALPP LNMNLARYLV IQGIKSKKIR ARSALRPLDV AGLSQLLVQV 660
  661 SNLIVDCPEI QRLDIHPLLA SGSEFTALDV TLDISPFEGD NESRLAVRPY PHQLEEWVEL 720
  721 KNGERCLFRP ILPEDEPQLQ QFISRVTKED LYYRYFSEIN EFTHEDLANM TQIDYDREMA 780
  781 FVAVRRIDQT EEILGVTRAI SDPDNIDAEF AVLVRSDLKG LGLGRRLMEK LITYTRDHGL 840
  841 QRLNGITMPN NRGMVALARK LGFNVDIQLE EGIVGLTLNL AQREES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..60] PSI-BLAST 96.522879 No description for 2csuA was found.
    2 View Details [61..343] PSI-BLAST 38.69897 Succinyl-CoA synthetase, beta-chain, C-terminal domain; Succinyl-CoA synthetase, beta-chain, N-terminal domain
    3 View Details [344..446] FFAS03 3.18 No description for 2csuA was found.
    4 View Details [447..699] PSI-BLAST 32.69897 Crystal structure of PH1788 from Pyrococcus horikoshii Ot3
    5 View Details [700..886] PSI-BLAST 9.0 The crystal structure of a probable N-acetyltransferase from Pseudomonas aeruginosa

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.03099072397093 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.442294542097958 bayes_pls_golite062009
    2
    Term Confidence Notes
  • ligase activity
    		•  2.65834437588388 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  2.03020006934407 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  1.97356692026797 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  1.97320026759321 bayes_pls_golite062009
  • CoA-ligase activity
    		•  1.70650205723619 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  1.65304911485061 bayes_pls_golite062009
  • succinate-CoA ligase (ADP-forming) activity
    		•  1.55053478055591 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  1.47371551641074 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  1.34583813987229 bayes_pls_golite062009
  • biotin carboxylase activity
    		•  0.434630727705062 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.311469287876404 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.239594107637156 bayes_pls_golite062009
  • glutathione synthase activity
    		•  0.158287661667506 bayes_pls_golite062009
    3
    Term Confidence Notes
  • succinate-CoA ligase activity
    		•  3.52802052141868 bayes_pls_golite062009
  • CoA-ligase activity
    		•  3.32683490551571 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  3.31605458365624 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  3.04561299684894 bayes_pls_golite062009
  • succinate-CoA ligase (ADP-forming) activity
    		•  2.98693702730095 bayes_pls_golite062009
  • catalytic activity
    		•  1.7583229741529 bayes_pls_golite062009
  • ligase activity
    		•  1.3838037949679 bayes_pls_golite062009
  • ATP citrate synthase activity
    		•  1.05845534244237 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  0.16119750312318 bayes_pls_golite062009
    4 No functions predicted.
    5
    Term Confidence Notes
  • acetyltransferase activity
    		•  3.80196053262573 bayes_pls_golite062009
  • acyltransferase activity
    		•  3.60905247184823 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  3.57844985672878 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  3.17094374417123 bayes_pls_golite062009
  • catalytic activity
    		•  1.97933499002461 bayes_pls_golite062009
  • transferase activity
    		•  1.72447231774431 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.890897647236405 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  0.498634717186713 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle