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Protein Overview: gi|20148643, gi|...

General Information:
Name(s) found: gi|22327619 [NCBI NR]
gi|20148643 [NCBI NR]
gi|17065382 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|22327619|ref|NP_199451.2| peptidase S41 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20148643|gb|AAM10212.1| carboxy-terminal proteinase D1-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17065382|gb|AAL32845.1| carboxy-terminal proteinase D1-like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: thylakoid lumen [IDA]
    Biological Process: proteolysis [IEA]
    Molecular Function: protein binding [IEA]
    serine-type peptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLLPFSSP LSATSSPSTP QFIPELPPPS QFDYSGLTKI LKKSVIGTLT GALSLTLVFS  60
   61 SPISSVAATN DPYLSVNPPS SSFESSLNHF DSAPEDCPNE EEADTEIQDD DIEPQLVTNE 120
  121 GIVEEAWEIV NGAFLDTRSH SWTPETWQKQ KDDILASPIK SRSKAHEVIK NMLASLGDQY 180
  181 TRFLSPDEFS RMSKYDITGI GINLREVSDG GGNVKLKVLG LVLDSAADIA GVKQGDEILA 240
  241 VNGMDVSGKS SFEVSSLLQG PSKTFVVLKV KHGKCGPVKS LKIQRQVNAQ TPVSYRLEKV 300
  301 DNGTVSVGYI RLKEFNALAR KDLVIAMKRL LDKGASYFVM DLRDNLGGLV QAGIETAKLF 360
  361 LDEGDTVIYT AGRDPEAQKT VVSDKKPLIT APLIVCDESC KPVNLSHYYV ILHLALIRIL 420
  421 IIVAGNGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 18.0 X11
    2 View Details [136..428] PSI-BLAST 59.30103 Photosystem II D1 C-terminal processing protease

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.597587183571285 bayes_pls_golite062009
  • protein binding
    		•  0.29116370406325 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.931482963660932 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle