| Protein: | gi|20148643, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20148643, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
332.0 | [0..1] | [428..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MRLLLPFSSP LSATSSPSTP QFIPELPPPS QFDYSGLTKI LKKSVIGTLT GALSLTLVFS 60
61 SPISSVAATN DPYLSVNPPS SSFESSLNHF DSAPEDCPNE EEADTEIQDD DIEPQLVTNE 120
121 GIVEEAWEIV NGAFL
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1aqcA |
| Description: | X11 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.597587183571285 | bayes_pls_golite062009 |
| protein binding | 0.29116370406325 | bayes_pls_golite062009 |
|
Region A: Residues: [136-428] |
1 11 21 31 41 51
| | | | | |
1 DTRSHSWTPE TWQKQKDDIL ASPIKSRSKA HEVIKNMLAS LGDQYTRFLS PDEFSRMSKY 60
61 DITGIGINLR EVSDGGGNVK LKVLGLVLDS AADIAGVKQG DEILAVNGMD VSGKSSFEVS 120
121 SLLQGPSKTF VVLKVKHGKC GPVKSLKIQR QVNAQTPVSY RLEKVDNGTV SVGYIRLKEF 180
181 NALARKDLVI AMKRLLDKGA SYFVMDLRDN LGGLVQAGIE TAKLFLDEGD TVIYTAGRDP 240
241 EAQKTVVSDK KPLITAPLIV CDESCKPVNL SHYYVILHLA LIRILIIVAG NGK
|
| Detection Method: | |
| Confidence: | 59.30103 |
| Match: | 1fc6A |
| Description: | Photosystem II D1 C-terminal processing protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.931482963660932 | bayes_pls_golite062009 |
