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Protein Overview: gi|51247771

General Information:
Name(s) found: gi|51247771 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|51247771|pdb|1TXL|A Chain A, Crystal Structure Of Metal-Binding Protein Yoda From E. Coli, Pfam Duf149 [NCBI NR]
    • Organism: Escherichia coli
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIRLYKLAVA LGVFIVSAPA FSHGHHSHGK PLTEVEQKAA NGVFDDANVQ NRTLSDWDGV  60
   61 WQSVYPLLQS GKLDPVFQKK ADADKTKTFA EIKDYYHKGY ATDIEMIGIE DGIVEFHRNN 120
  121 ETTSCKYDYD GYKILTYKSG KKGVRYLFEC KDPESKAPKY IQFSDHIIAP RKSSHFHIFM 180
  181 GNDSQQSLLN EMENWPTYYP YQLSSEEVVE EMMSH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|51247771

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 98.522879 Crystal structure of refined tetragonal crystal of YodA from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.74451860528271 bayes_pls_golite062009
  • transporter activity
    		•  0.771609213367404 bayes_pls_golite062009
  • lipid binding
    		•  0.341999817340849 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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