YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51247771
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIRLYKLAVA LGVFIVSAPA FSHGHHSHGK PLTEVEQKAA NGVFDDANVQ NRTLSDWDGV  60
   61 WQSVYPLLQS GKLDPVFQKK ADADKTKTFA EIKDYYHKGY ATDIEMIGIE DGIVEFHRNN 120
  121 ETTSCKYDYD GYKILTYKSG KKGVRYLFEC KDPESKAPKY IQFSDHIIAP RKSSHFHIFM 180
  181 GNDSQQSLLN EMENWPTYYP YQLSSEEVVE EMMSH

Type	Start	End	Confidence
Cytoplasmic	1	6	0.51
Transmembrane Helix	7	25	0.56
Non-Cytoplasmic	26	215	0.97