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Protein Overview: gi|49259509, gi|...

General Information:
Name(s) found: gi|49259510 [NCBI NR]
gi|49259509 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|49259510|pdb|1V9K|B Chain B, The Crystal Structure Of The Catalytic Domain Of Pseudouridine Synthase Rluc From Escherichia Coli [NCBI NR]
  • gi|49259509|pdb|1V9K|A Chain A, The Crystal Structure Of The Catalytic Domain Of Pseudouridine Synthase Rluc From Escherichia Coli [NCBI NR]
    • Organism: Escherichia coli
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADVIXYEDDH ILVLNKPSGT AVHGGSGLSF GVIEGLRALR PEARFLELVH RLDRDTSGVL  60
   61 LVAKKRSALR SLHEQLREKG XQKDYLALVR GQWQSHVKSV QAPLLKNILQ SGERIVRVSQ 120
  121 EGKPSETRFK VEERYAFATL VRCSPVTGRT HQIRVHTQYA GHPIAFDDRY GDREFDRQLT 180
  181 EAGTGLNRLF LHAAALKFTH PGTGEVXRIE APXDEGLKRC LQKXRNAR

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|189095939, gi... gi|49259509, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..228] PSI-BLAST 66.154902 The crystal structure of the catalytic domain of pseudouridine synthase RluC from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pseudouridine synthase activity
    		•  5.60483019625575 bayes_pls_golite062009
  • intramolecular transferase activity
    		•  4.62815459483632 bayes_pls_golite062009
  • isomerase activity
    		•  3.43067391737824 bayes_pls_golite062009
  • catalytic activity
    		•  2.39224964671205 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle