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Protein Overview: gi|16974933, gi|...

General Information:
Name(s) found: gi|49258411 [NCBI NR]
gi|49258410 [NCBI NR]
gi|16974934 [NCBI NR]
gi|16974933 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|49258411|pdb|1P1X|B Chain B, Comparison Of Class I Aldolase Binding Site Architecture Based On The Crystal Structure Of 2-Deoxyribose-5- Phosphate Aldolase Determined At 0.99 Angstrom Resolution [NCBI NR]
  • gi|49258410|pdb|1P1X|A Chain A, Comparison Of Class I Aldolase Binding Site Architecture Based On The Crystal Structure Of 2-Deoxyribose-5- Phosphate Aldolase Determined At 0.99 Angstrom Resolution [NCBI NR]
  • gi|16974934|pdb|1JCL|B Chain B, Observation Of Covalent Intermediates In An Enzyme Mechanism At Atomic Resolution [NCBI NR]
  • gi|16974933|pdb|1JCL|A Chain A, Observation Of Covalent Intermediates In An Enzyme Mechanism At Atomic Resolution [NCBI NR]
    • Organism: Escherichia coli
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HMTDLKASSL RALKLMDLTT LNDDDTDEKV IALCHQAKTP VGNTAAICIY PRFIPIARKT  60
   61 LKEQGTPEIR IATVTNFPHG NDDIDIALAE TRAAIAYGAD EVDVVFPYRA LMAGNEQVGF 120
  121 DLVKACKEAC AAANVLLKVI IETGELKDEA LIRKASEISI KAGADFIKTS TGKVAVNATP 180
  181 ESARIMMEVI RDMGVEKTVG FKPAGGVRTA EDAQKYLAIA DELFGADWAD ARHYRFGASS 240
  241 LLASLLKALG HGDGKSASSY

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|134105085, gi... gi|16974933, gi|... gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..260] PSI-BLAST 59.522879 Deoxyribose-phosphate aldolase DeoC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • deoxyribose-phosphate aldolase activity
    		•  2.42732299324236 bayes_pls_golite062009
  • kinase activity
    		•  1.94076427145239 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  1.57588823292155 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  1.53236719840557 bayes_pls_golite062009
  • transaldolase activity
    		•  1.20024248197006 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle