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Protein Overview: gi|218186206

General Information:
Name(s) found: gi|218186206 [NCBI NR]
Description(s) found:
  • gi|218186206|gb|EEC68633.1| hypothetical protein OsI_37024 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKKIREYD SKRLLKEHLK RLAGIDLQIL SAQVTQSTDF TELVNQQPWL STMKLVVKPD  60
   61 MLFGKRGKSG LVALNLDIAQ VKEFVKERLG VEVEMGGCKA PITTFIVEPF VPHDQEYYLS 120
  121 IVSERLGSTI SFSECGGIEI EENWDKVKTI FLPTEKPMTP DACAPLIATL PLEARGKIGD 180
  181 FIKGVFAVFQ DLDFSFLEMN PFTIVNGEPY PLDMRGELDD TAAFKNFKKW GNIEFPLPFG 240
  241 RVLSSTEGFI HDLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN 300
  301 YAEYSGAPNE EEVLQYARVV LDCATADPDG RKRALLIGGG IANFTDVGAT FSGIIRALRE 360
  361 KESKLKAARM HIYVRRGGPN YQTGLAKMRK LGAELGVPIE VYGPEATMTG ICKQAIECVM 420
  421 AAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..423] PSI-BLAST 87.0 Succinyl-CoA synthetase, beta-chain, C-terminal domain; Succinyl-CoA synthetase, beta-chain, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ATP citrate synthase activity
    		•  3.90324332109654 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  3.81289459554571 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  3.76609472018505 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  3.48441591588603 bayes_pls_golite062009
  • ligase activity
    		•  3.25077459445999 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  3.09962677647723 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • biotin carboxylase activity
    		•  2.20454959516404 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  2.11906303325597 bayes_pls_golite062009
  • succinate-CoA ligase (ADP-forming) activity
    		•  1.94897701568391 bayes_pls_golite062009
  • CoA-ligase activity
    		•  1.70650205723619 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  1.65304911485061 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  1.34604636411023 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  0.942503524309464 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.239594107637156 bayes_pls_golite062009
  • glutathione synthase activity
    		•  0.158287661667506 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle