YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: KAN1_ARATH

General Information:
Name(s) found: KAN1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 403 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: carpel development [IGI]
    xylem and phloem pattern formation [IMP]
    radial pattern formation [IMP]
    ovule development [IGI]
    polarity specification of adaxial/abaxial axis [IGI]
    abaxial cell fate specification [IMP]
    adaxial/abaxial axis specification [IMP]
    organ morphogenesis [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMEGVFLEK TKTNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQL ENNNRSSNFE  60
   61 LSLSHHNHPT ARIFHCPDRR TLNLPHQQHY NNPIINGVHQ RVDESEISNL HRPIRGIPVY 120
  121 HNRSFPFHQQ NSSLPSLGGG DMDQISILNS SSGYNNAYRS LQSSPRLKGV PLHHHHHHNQ 180
  181 YGVVGSSDSS SPHHHNHHHH GMIRSRFLPK MPTKRSMRAP RMRWTSSLHA RFVHAVELLG 240
  241 GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTNKP AASSDGSGEE EMGINGNEVH 300
  301 HQSSTDQRAQ SDDTSLHQET DISSTQPRWS NSSRETWPLS NNCSSDIDTM IRTSSTSMIS 360
  361 HYQRSSIQNQ EQRSNDQAKR CGNLSCENPS LEFTLGRPDW HEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 4.522879 NTRC receiver domain
    2 View Details [133..207] deduced N/A No confident structure predictions are available.
    3 View Details [208..343] PSI-BLAST 19.045757 Arr10-B
    4 View Details [344..403] MSA 3.086996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.07885074402355 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.07885074402355 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.72455852503325 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.53373140048441 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle