Protein Overview: gi|220959240, gi...

General Information:
Name(s) found:	gi\|220959240 [NCBI NR] gi\|220950288 [NCBI NR]
Description(s) found: Found 2 descriptions. SHOW ALL	gi\|220959240\|gb\|ACL92163.1\| CG5380-PA [synthetic construct] [NCBI NR] gi\|220950288\|gb\|ACL87687.1\| CG5380-PA [synthetic construct] [NCBI NR]
Organism:	synthetic construct
Length:	293 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEVSQLLL AVVQGIPAGA TNDDLTKALP DVPAATRVEA LNILLQEGGI EILKKGEKLV  60
   61 YRAKDPEKKS ALPKDADNEE KVVYGIVEEG GNKGIWIRDI RMKSNLNMIQ LNKILKNLET 120
  121 KKLIKAVKSV NASKKKVYML YNLEPDLSIT GGAWYQDQDF EVEFVDVLNQ QCLRFLQMKR 180
  181 DSAEKKREGP LAFKQMSCCT VNEVQKFISD LGISKVNLAE ADLETILKTV VYDGNAERVR 240
  241 QQDGSFVYRA VNAPLPPTGL VQMPCGICPV IKNCSNCGDV TAITCEYMRD WLD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..74]	FFAS03	5.5	No description for 2dk8A was found.
2	View Details	[75..130]	PSI-BLAST	26.221849	No description for 2yu3A was found.
3	View Details	[131..293]	Pfam	45.337242	No description for PF05158.3 was found. No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
transcription regulator activity	5.23858959608048	bayes_pls_golite062009
DNA binding	4.78517210147551	bayes_pls_golite062009
nucleic acid binding	4.72059012764202	bayes_pls_golite062009
DNA-directed RNA polymerase activity	4.34522534923857	bayes_pls_golite062009
RNA polymerase activity	4.34522534923857	bayes_pls_golite062009
transcription factor activity	4.02736190679869	bayes_pls_golite062009
binding	3.37660003833383	bayes_pls_golite062009
nucleotidyltransferase activity	2.82260867370675	bayes_pls_golite062009
sequence-specific DNA binding	2.21432668306508	bayes_pls_golite062009
transferase activity	2.21031006146354	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	2.16473039675898	bayes_pls_golite062009
transcription activator activity	2.13702350917359	bayes_pls_golite062009
transcription repressor activity	1.9708626903609	bayes_pls_golite062009
RNA polymerase II transcription factor activity	1.50332889556988	bayes_pls_golite062009
transcription factor binding	0.752335897765285	bayes_pls_golite062009
protein binding	0.726445167461826	bayes_pls_golite062009
general RNA polymerase II transcription factor activity	0.451714629708561	bayes_pls_golite062009

2

No functions predicted.

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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