YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|190405359

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..565]
[597..608]
PSI-BLAST 11000.0 Aconitase A, C-terminal domain; Aconitase A, N-terminal domain
2 View Details [566..596]
[609..778]
PSI-BLAST 11000.0 Aconitase A, C-terminal domain; Aconitase A, N-terminal domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • 3-isopropylmalate dehydratase activity
  • 11.6597692115322 bayes_pls_golite062009
  • aconitate hydratase activity
  • 5.86356477922338 bayes_pls_golite062009
  • structural constituent of ribosome
  • 2.93956285477489 bayes_pls_golite062009
  • catalytic activity
  • 2.4040324437254 bayes_pls_golite062009
  • nucleic acid binding
  • 2.25736437672211 bayes_pls_golite062009
  • carbon-oxygen lyase activity
  • 2.08349115784849 bayes_pls_golite062009
  • hydro-lyase activity
  • 2.04845291489052 bayes_pls_golite062009
  • lyase activity
  • 2.0080619912194 bayes_pls_golite062009
  • metal cluster binding
  • 1.70706327499066 bayes_pls_golite062009
  • iron-sulfur cluster binding
  • 1.70706327499066 bayes_pls_golite062009
  • binding
  • 1.67914740974449 bayes_pls_golite062009
  • DNA binding
  • 1.6436451615422 bayes_pls_golite062009
  • iron-responsive element binding
  • 1.1980380564483 bayes_pls_golite062009
  • iron ion binding
  • 1.12961684198784 bayes_pls_golite062009
  • 4 iron, 4 sulfur cluster binding
  • 1.11810757572823 bayes_pls_golite062009
  • mRNA binding
  • 1.0310744464034 bayes_pls_golite062009
  • structural molecule activity
  • 0.870913754566634 bayes_pls_golite062009
  • RNA binding
  • 0.42311333660604 bayes_pls_golite062009
  • transition metal ion binding
  • 0.342428816025605 bayes_pls_golite062009
  • protein binding
  • 0.232638130896339 bayes_pls_golite062009
  • cation binding
  • 0.0272064751959212 bayes_pls_golite062009
  • metal ion binding
  • 0.0272064751959212 bayes_pls_golite062009
  • ion binding
  • 0.0228992031160024 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle