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Protein Overview: gi|37927075, gi|...

General Information:
Name(s) found: gi|37927076 [NCBI NR]
gi|37927075 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|37927076|pdb|1O5K|B Chain B, Crystal Structure Of Dihydrodipicolinate Synthase (Tm1521) From Thermotoga Maritima At 1.80 A Resolution [NCBI NR]
  • gi|37927075|pdb|1O5K|A Chain A, Crystal Structure Of Dihydrodipicolinate Synthase (Tm1521) From Thermotoga Maritima At 1.80 A Resolution [NCBI NR]
    • Organism: Thermotoga maritima
    Length: 306 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDKIHHHH HHMFRGVGTA IVTPFKNGEL DLESYERLVR YQLENGVNAL IVLGTTGESP  60
   61 TVNEDEREKL VSRTLEIVDG KIPVIVGAGT NSTEKTLKLV KQAEKLGANG VLVVTPYYNK 120
  121 PTQEGLYQHY KYISERTDLG IVVYNVPGRT GVNVLPETAA RIAADLKNVV GIXEANPDID 180
  181 QIDRTVSLTK QARSDFMVWS GNDDRTFYLL CAGGDGVISV VSNVAPKQMV ELCAEYFSGN 240
  241 LEKSREVHRK LRPLMKALFV ETNPIPVKAA LNLMGFIENE LRLPLVPASE KTVELLRNVL 300
  301 KESGLL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|122921233, gi... gi|37927075, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] PSI-BLAST 105.0 Crystal structure of Dihydrodipicolinate synthase (TM1521) from Thermotoga maritima at 1.80 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • 3-deoxy-7-phosphoheptulonate synthase activity
    		•  2.02591266233154 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  1.7625405035454 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  1.72893315846141 bayes_pls_golite062009
  • transaldolase activity
    		•  1.38790063456575 bayes_pls_golite062009
  • lyase activity
    		•  0.740424046054758 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009
  • binding
    		•  0.038419829456847 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle