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Protein Overview: gi|28373429, gi|...

General Information:
Name(s) found: gi|28373429 [NCBI NR]
gi|13399494 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|28373429|pdb|1J2X|A Chain A, Crystal Structure Of Rap74 C-Terminal Domain Complexed With Fcp1 C-Terminal Peptide [NCBI NR]
  • gi|13399494|pdb|1I27|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Rap74 Subunit Of Human Transcription Factor Iif (Tfiif) [NCBI NR]
    • Organism: Homo sapiens
    Length: 73 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPLGSGDVQV TEDAVRRYLT RKPMTTKDLL KKFQTKKTGL SSEQTVNVLA QILKRLNPER  60
   61 KMINDKMHFS LKE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|219109210, gi... gi|28373429, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] PSI-BLAST 26.522879 C-terminal domain of the rap74 subunit of TFIIF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle