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Protein Overview: TPC1_ARATH

General Information:
Name(s) found: TPC1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 733 amino acids

    Gene Ontology:
    Cellular Component: plant-type vacuole [IDA]
    vacuolar membrane [IDA]
    vacuole [IDA]
    plasma membrane [IDA][TAS]
    Biological Process: regulation of stomatal movement [IMP]
    calcium ion transport [IC][IMP]
    calcium-mediated signaling [IMP]
    seed germination [IMP]
    Molecular Function: calcium channel activity [IGI][IMP][ISS]
    voltage-gated calcium channel activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDPLIGRDS LGGGGTDRVR RSEAITHGTP FQKAAALVDL AEDGIGLPVE ILDQSSFGES  60
   61 ARYYFIFTRL DLIWSLNYFA LLFLNFFEQP LWCEKNPKPS CKDRDYYYLG ELPYLTNAES 120
  121 IIYEVITLAI LLVHTFFPIS YEGSRIFWTS RLNLVKVACV VILFVDVLVD FLYLSPLAFD 180
  181 FLPFRIAPYV RVIIFILSIR ELRDTLVLLS GMLGTYLNIL ALWMLFLLFA SWIAFVMFED 240
  241 TQQGLTVFTS YGATLYQMFI LFTTSNNPDV WIPAYKSSRW SSVFFVLYVL IGVYFVTNLI 300
  301 LAVVYDSFKE QLAKQVSGMD QMKRRMLEKA FGLIDSDKNG EIDKNQCIKL FEQLTNYRTL 360
  361 PKISKEEFGL IFDELDDTRD FKINKDEFAD LCQAIALRFQ KEEVPSLFEH FPQIYHSALS 420
  421 QQLRAFVRSP NFGYAISFIL IINFIAVVVE TTLDIEESSA QKPWQVAEFV FGWIYVLEMA 480
  481 LKIYTYGFEN YWREGANRFD FLVTWVIVIG ETATFITPDE NTFFSNGEWI RYLLLARMLR 540
  541 LIRLLMNVQR YRAFIATFIT LIPSLMPYLG TIFCVLCIYC SIGVQVFGGL VNAGNKKLFE 600
  601 TELAEDDYLL FNFNDYPNGM VTLFNLLVMG NWQVWMESYK DLTGTWWSIT YFVSFYVITI 660
  661 LLLLNLVVAF VLEAFFTELD LEEEEKCQGQ DSQEKRNRRR SAGSKSRSQR VDTLLHHMLG 720
  721 DELSKPECST SDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..413] PSI-BLAST 57.39794 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [414..733] FFAS03 4.58 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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