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Protein Overview: Y4117_ARATH

General Information:
Name(s) found: Y4117_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75100697|sp|O82500.1|Y4117_ARATH RecName: Full=Putative disease resistance protein At4g11170 [NCBI NR]
  • pir||T01916 hypothetical protein F2P3.8 - Arabidopsis thaliana [NCBI NR]
  • gi|3600057|gb|AAC35544.1| similar to several Arabidopsis thaliana disease resistance proteins [NCBI NR]
  • gi|15237080|ref|NP_192855.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 [Swiss-Prot]
  • hypothetical protein F2P3.8 - Arabidopsis thalianagi|3600057|gb|AAC35544.1| similar to several Arabidopsis thaliana disease resistance proteinsgi|15237080|ref|NP_192855.1| disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr4:6811123-6817126 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • similar to several Arabidopsis thaliana disease resistance proteins [nr-271106-contam.fasta]
  • ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr4:6811127-6817130 FORWARD LENGTH=1095 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1095 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: response to ozone [IEP]
    defense response [ISS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    transmembrane receptor activity [IEA]
    protein binding [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSNSWR YDVFPSFRGE DVRNNFLSHL LKEFESKGIV TFRDDHIKRS HTIGHELRAA  60
   61 IRESKISVVL FSENYASSSW CLDELIEIMK CKEEQGLKVM PVFYKVDPSD IRKQTGKFGM 120
  121 SFLETCCGKT EERQHNWRRA LTDAANILGD HPQNWDNEAY KITTISKDVL EKLNATPSRD 180
  181 FNDLVGMEAH IAKMESLLCL ESQGVRIVGI WGPAGVGKTT IARALYNQYH ENFNLSIFME 240
  241 NVRESYGEAG LDDYGLKLHL QQRFLSKLLD QKDLRVRHLG AIEERLKSQK VLIILDDVDN 300
  301 IEQLKALAKE NQWFGNKSRI VVTTQNKQLL VSHDINHMYQ VAYPSKQEAL TIFCQHAFKQ 360
  361 SSPSDDLKHL AIEFTTLAGH LPLALRVLGS FMRGKGKEEW EFSLPTLKSR LDGEVEKVLK 420
  421 VGYDGLHDHE KDLFLHIACI FSGQHENYLK QMIIANNDTY VSFGLQVLAD KSLIQKFENG 480
  481 RIEMHSLLRQ LGKEVVRKQS IYEPGKRQFL MNAKETCGVL SNNTGTGTVL GISLDMCEIK 540
  541 EELYISEKTF EEMRNLVYLK FYMSSPIDDK MKVKLQLPEE GLSYLPQLRL LHWDAYPLEF 600
  601 FPSSFRPECL VELNMSHSKL KKLWSGVQPL RNLRTMNLNS SRNLEILPNL MEATKLNRLD 660
  661 LGWCESLVEL PSSIKNLQHL ILLEMSCCKK LEIIPTNINL PSLEVLHFRY CTRLQTFPEI 720
  721 STNIRLLNLI GTAITEVPPS VKYWSKIDEI CMERAKVKRL VHVPYVLEKL CLRENKELET 780
  781 IPRYLKYLPR LQMIDISYCI NIISLPKLPG SVSALTAVNC ESLQILHGHF RNKSIHLNFI 840
  841 NCLKLGQRAQ EKIHRSVYIH QSSYIADVLP GEHVPAYFSY RSTGSSIMIH SNKVDLSKFN 900
  901 RFKVCLVLGA GKRFEGCDIK FYKQFFCKPR EYYVPKHLDS PLLKSDHLCM CEFELMPPHP 960
  961 PTEWELLHPN EFLEVSFESR GGLYKCEVKE CGLQFLEPHE TSEFRYLSPH LYLGGSWIGN1020
 1021 SSSSIEEIIH VDQEESSSDS EEIIYADQEE SSSGIEEIIH AEREGTNRRK SVMRWIKVGA1080
 1081 RKMGLSLECL KPWTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] Pfam 63.522879 No description for PF01582.12 was found. No confident structure predictions are available.
    2 View Details [177..522] PSI-BLAST 13.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [523..1095] PSI-BLAST 21.39794 No description for 3cigA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle