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Protein Overview: gi|42563017, gi|...

General Information:
Name(s) found: gi|66792692 [NCBI NR]
gi|42563017 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|66792692|gb|AAY56448.1| At1g67440 [Arabidopsis thaliana] [NCBI NR]
  • gi|42563017|ref|NP_176911.2| emb1688 (embryo defective 1688); GTP binding / GTPase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in seed dormancy [NAS]
    Molecular Function: GTP binding [IEA]
    GTPase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAKHIGKN YSSSLSPVLS PEHKPSLLES QAIGTVATAQ ANFMRVIVQD VANSVTSDDD  60
   61 NDSSKTGVEL LCVVRAVLKK IRRRVLVGDK VLVGSIDWVD RRGMIENVFH RRSEILDPPV 120
  121 ANVDHLLVLF SLDQPKLEPF TLTRFLVEAE STRIPLTLAL NKTELISEEE LETWKIRLRG 180
  181 WNYEPLFCSV GTKDGLDDIA FVLRDQTSVI VGPSGVGKSS LINVLRSNHG GGVVEDENWF 240
  241 EPMLGNKWFD DQRVGEVSSR SGRGKHTTRN VSLLPVSEGG YLADTPGFNQ PSLLKVTKHS 300
  301 LAHCFPEIRN MIESEKCGFR DCLHIGEPGC VVKGDWERYP YYLQLLDEIR IREEFQLRTF 360
  361 GTKREDDVRY KVGDMGVKHA EPRLMPKKHR RESRKKTKQT MISELDEFED EDSDLYIEND 420
  421 PIVQAIENEN KRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..433] PSI-BLAST 39.0 The crystal structure of YloQ, a circularly permuted GTPase.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.11019906626642 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.788887365520783 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.787931859014298 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.497191485940443 bayes_pls_golite062009
  • catalytic activity
    		•  0.458437698837681 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle