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View Structure Prediction Details

Protein: gi|42563017, gi|...
Organism: Arabidopsis thaliana
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42563017, gi|....

Description E-value Query
Range
Subject
Range
gi|3176667, gi|7... - pir||T02162 hypothetical protein T1F15.10 - Arabidopsis thaliana, gi|3176667|gb|AAC18791.1| Similar...
279.0 [0..1] [433..1]

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Predicted Domain #1
Region A:
Residues: [1-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAKHIGKN YSSSLSPVLS PEHKPSLLES QAIGTVATAQ ANFMRVIVQD VANSVTSDDD  60
   61 NDSSKTGVEL LCVVRAVLKK IRRRVLVGDK VLVGSIDWVD RRGMIENVFH RRSEILDPPV 120
  121 ANVDHLLVLF SLDQPKLEPF TLTRFLVEAE STRIPLTLAL NKTELISEEE LETWKIRLRG 180
  181 WNYEPLFCSV GTKDGLDDIA FVLRDQTSVI VGPSGVGKSS LINVLRSNHG GGVVEDENWF 240
  241 EPMLGNKWFD DQRVGEVSSR SGRGKHTTRN VSLLPVSEGG YLADTPGFNQ PSLLKVTKHS 300
  301 LAHCFPEIRN MIESEKCGFR DCLHIGEPGC VVKGDWERYP YYLQLLDEIR IREEFQLRTF 360
  361 GTKREDDVRY KVGDMGVKHA EPRLMPKKHR RESRKKTKQT MISELDEFED EDSDLYIEND 420
  421 PIVQAIENEN KRQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.0
Match: 1t9hA
Description: The crystal structure of YloQ, a circularly permuted GTPase.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.11019906626642 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.788887365520783 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.787931859014298 bayes_pls_golite062009
pyrophosphatase activity 0.497191485940443 bayes_pls_golite062009
catalytic activity 0.458437698837681 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle