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Protein Overview: gi|42562670

General Information:
Name(s) found: gi|42562670 [NCBI NR]
Description(s) found:
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  • gi|42562670|ref|NP_564588.2| MATE efflux family protein [Arabidopsis thaliana] [NCBI NR]
  • MATE efflux family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MATE efflux family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | MATE efflux family protein | chr1:19035702-19038349 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • antiporter/ drug transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | MATE efflux family protein | chr1:19032034-19034681 FORWARD LENGTH=509 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isoform 2 of MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE [ARATH-contam.fasta]
  • Isoform of Q9SYD6, Isoform 2 of Protein DETOXIFICATION 42 OS=Arabidopsis thaliana GN=DTX42 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 509 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    endomembrane system [IEA]
    Biological Process: drug transmembrane transport [IEA]
    Molecular Function: antiporter activity [IEA]
    drug transmembrane transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTQIFQET LYTFSLVISV LKFDELGLEI ARIALPAALA LTADPIASLV DTAFIGQIGP  60
   61 VELAAVGVSI ALFNQVSRIA IFPLVSITTS FVAEEDACSS QQDTVRDHKE CIEIGINNPT 120
  121 EETIELIPEK HKDSLSDEFK TSSSIFSISK PPAKKRNIPS ASSALIIGGV LGLFQAVFLI 180
  181 SAAKPLLSFM GVKHDSPMMR PSQRYLSLRS LGAPAVLLSL AAQGVFRGFK DTTTPLFATV 240
  241 IGDVTNIILD PIFIFVFRLG VTGAATAHVI SQYLMCGILL WKLMGQVDIF NMSTKHLQFC 300
  301 RFMKNGFLLL MRVIAVTFCV TLSASLAARE GSTSMAAFQV CLQVWLATSL LADGYAVAGQ 360
  361 AILASAFAKK DYKRAAATAS RVLQLGLVLG FVLAVILGAG LHFGARVFTK DDKVLHLISI 420
  421 GLPFVAGTQP INALAFVFDG VNFGASDFGY AAASLVMVAI VSILCLLFLS STHGFIGLWF 480
  481 GLTIYMSLRA AVGFWRIGTG TGPWSFLRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] MSA 1.855995 View MSA. Confident ab initio structure predictions are available.
    2 View Details [78..258] MSA 4.264993 View MSA. No confident structure predictions are available.
    3 View Details [259..509] Pfam 16.886057 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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