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Protein Overview: VAP22_ARATH

General Information:
Name(s) found: VAP22_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79317397|ref|NP_001031004.1| VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural molecule [Arabidopsis thaliana] [NCBI NR]
  • gi|30680831|ref|NP_172359.2| VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural molecule [Arabidopsis thaliana] [NCBI NR]
  • gi|222424668|dbj|BAH20288.1| AT1G08820 [Arabidopsis thaliana] [NCBI NR]
  • gi|222424397|dbj|BAH20154.1| AT1G08820 [Arabidopsis thaliana] [NCBI NR]
  • Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22 PE=1 SV=1 [Swiss-Prot]
  • vesicle-associated membrane family protein / VAMP family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Vesicle-associated membrane family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: VAP27-2 | VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural molecule | chr1:2821813-2824415 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural molecule [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: VAP27-2 | vamp/synaptobrevin-associated protein 27-2 | chr1:2821810-2824412 REVERSE LENGTH=386 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [IDA]
    plasma membrane [IDA]
    Biological Process: intracellular transport [TAS]
    Molecular Function: structural molecule activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP  60
   61 KSTCEFTVIM QAFKEPPPDM VCKDKFLIQS TAVSAETTDE DITASMFSKA EGKHIEENKL 120
  121 RVTLVPPSDS PELSPINTPK QGAVFEDSIL KDRLYSQSET LAPPQYEGEI VKEPRMVGHD 180
  181 ELKAADNAKE LKTPKMATVD FVEDRYTAND LKATKDSYDS SRMAKETGFD PIRSHKDADD 240
  241 GRAIKATTNL DAPMKKAMDL PRDQGFTNGI AVDSEPKISK ERDVVQLQKT DGQNVRGLDE 300
  301 LKLVKDIEEM KLKVDALESK LKQADSTISK LMEERSISSQ HRQSLQHELA ELRTKKIVKE 360
  361 VHNGFPLLYV CVVAFIAYVI GHFLRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] PSI-BLAST 31.0 Solution structure of the MSP domain of mouse VAMP-associated proteinA
    2 View Details [76..386] PSI-BLAST 8.154902 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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