| Protein: | VAP22_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 386 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAP22_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
209.0 | [0..1] | [337..1] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MNMPLLDIQP RTLQFAVDLK KQTSCVVQLT NTTHHYVAFK VKTTSPKKYC VRPNVGVVAP 60
61 KSTCEFTVIM QAFKE
|
| Detection Method: |  |
| Confidence: | 31.0 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [76-386] |
1 11 21 31 41 51
| | | | | |
1 PPPDMVCKDK FLIQSTAVSA ETTDEDITAS MFSKAEGKHI EENKLRVTLV PPSDSPELSP 60
61 INTPKQGAVF EDSILKDRLY SQSETLAPPQ YEGEIVKEPR MVGHDELKAA DNAKELKTPK 120
121 MATVDFVEDR YTANDLKATK DSYDSSRMAK ETGFDPIRSH KDADDGRAIK ATTNLDAPMK 180
181 KAMDLPRDQG FTNGIAVDSE PKISKERDVV QLQKTDGQNV RGLDELKLVK DIEEMKLKVD 240
241 ALESKLKQAD STISKLMEER SISSQHRQSL QHELAELRTK KIVKEVHNGF PLLYVCVVAF 300
301 IAYVIGHFLR T
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
