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Protein Overview: gi|111074418, gi...

General Information:
Name(s) found: gi|18400003 [NCBI NR]
gi|111074418 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|18400003|ref|NP_564469.1| WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|111074418|gb|ABH04582.1| At1g36070 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: heterotrimeric G-protein complex [ISS]
    CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQTKDDSDF EDDCETKKME TDTSAQEARN GKDIQGIQWE GFKYNRDEFR ETRLKQYDNF  60
   61 VNILRPSSRE KLDKEHGQVV EKGKNFYDFQ FNTRLVTSTI VHFQLRNLVW ATSKHDVYLM 120
  121 QNYSLMHWSS LLQRGKEVLN VARSVTPTQK LPGLFSEPLS RVQVSSMAVK ENLILLGGFD 180
  181 GELLCKCVNQ PGVAFCTRLS TEDNAITNTV DIYRDPSGSL RLITANNDCK IRVFDAQSFT 240
  241 RVSEFALDWS VNNTSVSPDG KLLAVVGDST ECLISDSHSG KVISSLRGHK DYSFASAWHP 300
  301 NGLILATGNQ DTACRLWDIR NPSESFAVLK GNMGAIRGLK FTPEGRFLAM AEPADFVHIF 360
  361 DTQSGFLQSQ EIDLFGEIAG ISFSPDTEAL YVGVADRTYG SLLEYKRRKD NHYMDSFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] PSI-BLAST 16.154902 Crystal Structure analysis of the beta-propeller protein Ski8p
    2 View Details [91..418] PSI-BLAST 60.69897 beta1-subunit of the signal-transducing G protein heterotrimer


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle