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Protein Overview: TPS3_ARATH

General Information:
Name(s) found: TPS3_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 730 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: trehalose biosynthetic process [ISS]
    Molecular Function: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYDNVCGER QTLLVVANRL PASAKRTGEH SWSLEMSPGG KFNLLVEKDA VSKSLAEMKC  60
   61 IPVFLNEVFD QYYNGYSNGI LWPILHHMGL PQEYDHDTIK TFETQYDAYK KANRMFLDVI 120
  121 KENYKDGDIV WCQDYHLMFL PQYLKEYNNK IKVGWFLHSP FPSSEIYKTL PSRSELLRSV 180
  181 LAADLISFHT YDFARHFVNT CTRILGVEGT HEGVVYQGRV TRVVVLPMGI YPNRFIKTCK 240
  241 LPEVIQQMNE LKDRFSGKKV ILGVDRLDMI KGIPQKYLGF EKFLDENPNW RDKIVLVQIA 300
  301 VPTRNEVPEY QKLKNQVHRL VGRINGRFGS VSSLPIHHMD CSVDSNYLCA LYAISDVMLV 360
  361 TSLRDGLNLV SHEFVACQEA KRGVLILSEF AGAGQSLGAG ALLVNPWNVT EVSSAIKKAL 420
  421 NMPYEERETR HRVNFKYVKT HSAEKWGFDF LSELNDAFDE SELQIRKIPH ELPQQDVIQR 480
  481 YSLSNNRLII LNFGEYKIWL AAENGMFLKH TTEEWVTNMP QNMNLDWVDG LKNVFKYFTD 540
  541 RTPRSFFEAS KTSLVWNYEY ADVEFGRAQA RDLLQYLWAG PISNASAEVV RGKYSVEVHA 600
  601 IGVTKEPEIG HILGEIVHKK AMTTPIDYVF CSGYFLEKDE DIYTFFESEI LSPKLSHETR 660
  661 SKSSSSNHSL EKKVSLNVLD LKQENYFSTA IGQARTKARY VVDSSHNVVN LLHKLAVANT 720
  721 TTTSVKKPNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..471] PSI-BLAST 71.69897 Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
    2 View Details [472..730] PSI-BLAST 6.69897 X-Ray structure of the sucrose-phosphatase (SPP) from Synechocystis sp. PCC6803 at 1.40 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
    		•  11.2045941324603 bayes_pls_golite062009
  • glucosyltransferase activity
    		•  8.25064561355471 bayes_pls_golite062009
  • UDP-glucosyltransferase activity
    		•  8.0463972704113 bayes_pls_golite062009
  • trehalose-phosphatase activity
    		•  7.58500038184065 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  3.70184884300914 bayes_pls_golite062009
  • catalytic activity
    		•  2.65148466065976 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.62403914335522 bayes_pls_golite062009
  • transferase activity
    		•  2.18054407163329 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.13085705769565 bayes_pls_golite062009
  • UDP-N-acetylglucosamine 2-epimerase activity
    		•  1.55280519670033 bayes_pls_golite062009
  • carbohydrate phosphatase activity
    		•  0.78952375993773 bayes_pls_golite062009
  • glycogen phosphorylase activity
    		•  0.607220464589157 bayes_pls_golite062009
  • binding
    		•  0.345236672370351 bayes_pls_golite062009
  • phosphorylase activity
    		•  0.296436712681472 bayes_pls_golite062009
  • mannosyltransferase activity
    		•  0.253888301381021 bayes_pls_golite062009
  • protein binding
    		•  0.198267161626932 bayes_pls_golite062009
    2
    Term Confidence Notes
  • trehalose-phosphatase activity
    		•  3.78859922218487 bayes_pls_golite062009
  • transporter activity
    		•  2.28749015584769 bayes_pls_golite062009
  • hydrolase activity
    		•  2.23636068759523 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.17051010073814 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.14633664297706 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.05684652641195 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.05060633349756 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.84740904871745 bayes_pls_golite062009
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.53201151596704 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.45647470429539 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.44542004757594 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.42792997211574 bayes_pls_golite062009
  • ATPase activity
    		•  1.40341876769691 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.352553895791 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
    		•  1.33388154652051 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.33292469269496 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.33065047107664 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.31602086166435 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.28050944646617 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.194344891491143 bayes_pls_golite062009
  • phosphatase activity
    		•  0.159899259988948 bayes_pls_golite062009
  • cation-transporting ATPase activity
    		•  0.15490458026932 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.143980906464589 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.103902756538853 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.053543166906854 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.041293091790546 bayes_pls_golite062009
  • binding
    		•  0.0209333912048011 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle