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Protein Overview: CCT15_ARATH

General Information:
Name(s) found: CCT15_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 579 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: flower development [IMP]
    regulation of viral reproduction [IMP]
    leaf development [IGI]
    regulation of cell cycle [ISS]
    trichome morphogenesis [IMP]
    response to virus [IEP]
    Molecular Function: cyclin-dependent protein kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVLAGECS YSESGVSSHS RNSHEKQEEV SRWYFGRKEI EENSPSRLDG IDLKKETYLR  60
   61 KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFFRQSHAKN DRRTIATVCM FLAGKVEETP 120
  121 RPLKDVIFVS YEIINKKDPG ASQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVYHPYK 180
  181 PLVEAIKKFK VAQNALAQVA WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD 240
  241 GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAQ RPGSRNAVST 300
  301 DEHVGSRQTS SVRSTHEQSN SDNHGGSSKG VLNQNNENGG GEAANVSVDN KEEIERETKE 360
  361 SSLHLESHPA HKDNVREAPH NSRPLVEGPG KDNSEREGGE LQDDGAVHKS RNVDVGDALI 420
  421 SQSPKDLKLL RDKVKAKREK AKKLLGERTR KKDLMDEDDL IERELEDVQL AVEDEKTKER 480
  481 KVQSRPKAEN SDLMGTEHGE ILDVKGEVKN TEEGEMVNNN VSPMMHSRKR KMGSPPEKQS 540
  541 EGKRRHNSEN GEESHKTSRG SSHHGDREHR RHSQENNHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 47.0 No description for 2pk2A was found.
    2 View Details [351..579] MSA 5.159996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • general RNA polymerase II transcription factor activity
    		•  8.12427628405368 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
    		•  3.64545486450168 bayes_pls_golite062009
  • cyclin-dependent protein kinase regulator activity
    		•  3.42865021590497 bayes_pls_golite062009
  • protein kinase regulator activity
    		•  2.96093967361332 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.795846725429 bayes_pls_golite062009
  • kinase regulator activity
    		•  2.79045953713534 bayes_pls_golite062009
  • binding
    		•  2.4204867358489 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.04886889839181 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.00665312545368 bayes_pls_golite062009
  • DNA binding
    		•  1.94297811210385 bayes_pls_golite062009
  • protein binding
    		•  1.47106731485576 bayes_pls_golite062009
  • transcription factor activity
    		•  1.21921365719206 bayes_pls_golite062009
  • enzyme regulator activity
    		•  1.07025055509935 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.992483856345281 bayes_pls_golite062009
  • transcription factor binding
    		•  0.749278791251235 bayes_pls_golite062009
  • transcription coactivator activity
    		•  0.138191616709499 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0696060248241566 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle