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Protein Overview: gi|18422298, gi|...

General Information:
Name(s) found: gi|18422298 [NCBI NR]
gi|117958761 [NCBI NR]
Description(s) found:
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  • gi|18422298|ref|NP_568621.1| peroxisomal membrane 22 kDa family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|117958761|gb|ABK59685.1| At5g43140 [Arabidopsis thaliana] [NCBI NR]
  • peroxisomal membrane 22 kDa family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | peroxisomal membrane 22 kDa family protein | chr5:17338798-17340452 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g43140 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr5:17321570-17323224 FORWARD LENGTH=254 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g43140 OS=Arabidopsis thaliana GN=At5g43140 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: peroxisomal membrane [ISS]
    integral to membrane [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIVGLSKRF FSDRRSLHGI NNALLKTVFT GRKPILGFSG RSIHELRKTG NFVIPRVFSV  60
   61 SRNLTTKASS SSSKQPAFLR WYLRKLESHP FMTKSITTSV IYMAADLTSQ MITMEPTGSF 120
  121 DLIRTARMAS FGLIFLGPSQ HLWFSYLSKI LPKRDVLTTF KKIMMGQVLF GPVSNTVFYS 180
  181 YNAALQGENS EEIVARLKRD LLPTLKNGLM YWPVCDFVTF KYVPVHLQPL MNSSCAYIWT 240
  241 IYLTYMANQT KADS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] MSA 1.167983 View MSA. No confident structure predictions are available.
    2 View Details [189..254] Pfam 8.60206 No description for PF04117.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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