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Protein Overview: gi|30688625

General Information:
Name(s) found: gi|30688625 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30688625|ref|NP_849473.1| ribitol kinase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 499 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: phosphotransferase activity, alcohol group as acceptor [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAELNPFP SRSVFLGVDV GTGSARAGLF DDNGKLLGSA TSPIQIWKDG DCIEQSSTDI  60
   61 WHAVCAAVKS ACSLANVSDV EVKGIGFAAT CSLVAVDAEG SPVTVSWSGD SRRNIIVWMD 120
  121 HRAVKQAERI NSFNSPVLQY CGGGVSPEME PPKLLWVKEN LKESWSMVYK WMDLSDWLSY 180
  181 RATGDDTRSL CTTVCKWTYL GHAHMHQMTE KASRDMEACG WDDEFWEEIG LGDLVDGHHA 240
  241 KIGRSVAFPG HPLGNGLTAT AAKELGLLAG TPVGTSLIDA HAGGVGVMEK SDVDTLCSRM 300
  301 VLVCGTSTCH MAVSREKLFI PGVWGPFWSA MVPEYWLTEG GQSATGALLD HIIENHVASP 360
  361 RLANRAASQK VSVFELLNNI LKTMAEDTSS PFISALTSDM HILPDFHGNR SPVADPNSKG 420
  421 VIFGMSLDTS EKQLALLYLA TIQGIAYGTR HIVEHCNTHG HKIDTLLACG GLSKNPLFIQ 480
  481 EHADIVVRLF FLEKASLFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..499] PSI-BLAST 124.0 Glycerol kinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glycerol kinase activity
    		•  5.25911418019759 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  2.33338276303563 bayes_pls_golite062009
  • binding
    		•  1.92007657015464 bayes_pls_golite062009
  • hexokinase activity
    		•  1.70516840340504 bayes_pls_golite062009
  • glucose binding
    		•  1.31275520745982 bayes_pls_golite062009
  • protein binding
    		•  0.856838411407636 bayes_pls_golite062009
  • glucokinase activity
    		•  0.47468456642723 bayes_pls_golite062009
  • kinase activity
    		•  0.460541310603011 bayes_pls_golite062009
  • sugar binding
    		•  0.44352406324938 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.381597272143844 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.324655711623803 bayes_pls_golite062009
  • catalytic activity
    		•  0.296484721581333 bayes_pls_golite062009
  • monosaccharide binding
    		•  0.13988576633855 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.132883501060045 bayes_pls_golite062009
  • hydrolase activity
    		•  0.13181840194556 bayes_pls_golite062009
  • transferase activity
    		•  0.105619024604158 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0477755517373659 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle