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Protein Overview: GR1_ARATH

General Information:
Name(s) found: GR1_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Protein gamma response 1 OS=Arabidopsis thaliana GN=GR1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 588 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: meiotic DNA double-strand break processing [IGI]
    gamete generation [IMP]
    response to DNA damage stimulus [IEP]
    response to ionizing radiation [IEP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDETVDGIE AKYISGLSTI MVATIQEAKD RISQIEYIFC SQLFPNFQSK SKAFEKVYSE  60
   61 ARLAACDTWK DREKSLLDQI EELKVENQQI KSDKEKLAEE LGKTASMPLR LTSLQGYIDH 120
  121 LKKKMKSRSK MVGDARDLYY RLVELLQVKG LDELSEDGIN MIVSEVKSLK MKTEFLQEEL 180
  181 SKKTLVTENL LKKLEYLSTE AADGERKLSS VEEEKQRLKT RLQVFEENVG RLEEILRQKT 240
  241 DEVEEGKTAL EVLQGKLKLT EREMLNCKQK IADHEKEKTV VMGKAKDDMQ GRHGSYLADL 300
  301 EALRCQSEEK SFELAMEIKK NKELSRTCKK WKSQHTFLCK RFNFTPDSVL HQSSLEDENK 360
  361 EIGQHEKSAI SSYLERKHSE TAEGADKVRI GTGSSGNNYE KESIIKTVQT PITSISPIVR 420
  421 SPGAAKPPQL SGLKRPASIW RDTRSRQSPG GHDPHDDFLD TPIENVKRVA GEEKHVHDVA 480
  481 KKDDSDDETQ DMNPKPSPSR QRIQIAETSK KSFKHVESVR KKAERENLKG IECKQCKKFY 540
  541 DAVHPENEGN GNKSLRCEHH EGVSRHRYRY APPMTPEGFW NIGFESEM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [99..442] PSI-BLAST 17.522879 Heavy meromyosin subfragment
    3 View Details [443..588] MSA 1.413994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle