Protein: | GR1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 588 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GR1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
247.0 | [0..3] | [567..2337] |
|
242.0 | [0..7] | [567..283] |
|
241.0 | [0..7] | [568..1448] |
|
240.0 | [0..7] | [570..1346] |
Region A: Residues: [1-98] |
1 11 21 31 41 51 | | | | | | 1 MGDETVDGIE AKYISGLSTI MVATIQEAKD RISQIEYIFC SQLFPNFQSK SKAFEKVYSE 60 61 ARLAACDTWK DREKSLLDQI EELKVENQQI KSDKEKLA |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.882 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
Region A: Residues: [99-442] |
1 11 21 31 41 51 | | | | | | 1 EELGKTASMP LRLTSLQGYI DHLKKKMKSR SKMVGDARDL YYRLVELLQV KGLDELSEDG 60 61 INMIVSEVKS LKMKTEFLQE ELSKKTLVTE NLLKKLEYLS TEAADGERKL SSVEEEKQRL 120 121 KTRLQVFEEN VGRLEEILRQ KTDEVEEGKT ALEVLQGKLK LTEREMLNCK QKIADHEKEK 180 181 TVVMGKAKDD MQGRHGSYLA DLEALRCQSE EKSFELAMEI KKNKELSRTC KKWKSQHTFL 240 241 CKRFNFTPDS VLHQSSLEDE NKEIGQHEKS AISSYLERKH SETAEGADKV RIGTGSSGNN 300 301 YEKESIIKTV QTPITSISPI VRSPGAAKPP QLSGLKRPAS IWRD |
Detection Method: | |
Confidence: | 17.522879 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [443-588] |
1 11 21 31 41 51 | | | | | | 1 TRSRQSPGGH DPHDDFLDTP IENVKRVAGE EKHVHDVAKK DDSDDETQDM NPKPSPSRQR 60 61 IQIAETSKKS FKHVESVRKK AERENLKGIE CKQCKKFYDA VHPENEGNGN KSLRCEHHEG 120 121 VSRHRYRYAP PMTPEGFWNI GFESEM |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.