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Protein Overview: gi|30689469

General Information:
Name(s) found: gi|30689469 [NCBI NR]
Description(s) found:
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  • gi|30689469|ref|NP_850400.1| SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase [Arabidopsis thaliana] [NCBI NR]
  • acyl-[acyl-carrier-protein] desaturase / stearoyl-ACP desaturase (SSI2) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Acyl-(acyl-carrier-protein) desaturase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: FAB2, SSI2 | SSI2 (fatty acid biosynthesis 2); acyl-[acyl-carrier-protein] desaturase | chr2:18127184-18129572 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • SSI2; acyl-[acyl-carrier protein] desaturase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SSI2, FAB2 | Plant stearoyl-acyl-carrier-protein desaturase family protein | chr2:18120107-18122495 FORWARD LENGTH=401 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Acyl-[acyl-carrier-protein] desaturase OS=Arabidopsis thaliana GN=SSI2 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of O22832, Acyl-[acyl-carrier-protein] desaturase OS=Arabidopsis thaliana GN=SSI2 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: unsaturated fatty acid biosynthetic process [TAS]
    jasmonic acid biosynthetic process [TAS]
    lipid biosynthetic process [IMP]
    defense response to virus [IEP][IMP]
    defense response [IMP]
    defense response to bacterium [IMP]
    fatty acid metabolic process [IDA][IMP]
    Molecular Function: stearoyl-CoA 9-desaturase activity [IDA][IMP]
    acyl-[acyl-carrier-protein] desaturase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR  60
   61 EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW QPQDFLPDPA SDGFEDQVRE 120
  121 LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE 180
  181 ENRHGDLLNK YLYLSGRVDM RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS 240
  241 HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK 300
  301 ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK 360
  361 AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..401] PSI-BLAST 176.0 delta 9-stearoyl-acyl carrier protein desaturase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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