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View Structure Prediction Details

Protein: gi|30689469
Organism: Arabidopsis thaliana
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30689469.

Description E-value Query
Range
Subject
Range
gi|951427 - gi|951427|gb|AAA74692.1| stearoyl-acyl-carrier protein desaturase
648.0 [0..1] [401..17]

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Predicted Domain #1
Region A:
Residues: [1-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR  60
   61 EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW QPQDFLPDPA SDGFEDQVRE 120
  121 LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE 180
  181 ENRHGDLLNK YLYLSGRVDM RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS 240
  241 HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK 300
  301 ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK 360
  361 AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 176.0
Match: 1oq4A
Description: delta 9-stearoyl-acyl carrier protein desaturase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle