YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30689469
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKFNPLVA SQPYKFPSST RPPTPSFRSP KFLCLASSSP ALSSGPKSVE SLKKPFTPPR  60
   61 EVHVQVLHSM PPQKIEIFKS MENWAEENLL IHLKDVEKSW QPQDFLPDPA SDGFEDQVRE 120
  121 LRERARELPD DYFVVLVGDM ITEEALPTYQ TMLNTLDGVR DETGASPTSW AIWTRAWTAE 180
  181 ENRHGDLLNK YLYLSGRVDM RQIEKTIQYL IGSGMDPRTE NNPYLGFIYT SFQERATFIS 240
  241 HGNTARQAKE HGDIKLAQIC GTIAADEKRH ETAYTKIVEK LFEIDPDGTV MAFADMMRKK 300
  301 ISMPAHLMYD GRNDNLFDNF SSVAQRLGVY TAKDYADILE FLVGRWKIQD LTGLSGEGNK 360
  361 AQDYLCGLAP RIKRLDERAQ ARAKKGPKIP FSWIHDREVQ L

Type	Start	End	Confidence
Signal Peptide	1	43	0.92
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	401	0.99