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Protein Overview: gi|7245349, gi|7...

General Information:
Name(s) found: gi|7245349 [NCBI NR]
gi|7245348 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|7245349|pdb|1D1Q|B Chain B, Crystal Structure Of A Yeast Low Molecular Weight Protein Tyrosine Phosphatase (Ltp1) Complexed With The Substrate Pnpp [NCBI NR]
  • gi|7245348|pdb|1D1Q|A Chain A, Crystal Structure Of A Yeast Low Molecular Weight Protein Tyrosine Phosphatase (Ltp1) Complexed With The Substrate Pnpp [NCBI NR]
    • Organism: Saccharomyces cerevisiae
    Length: 161 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIEKPKISV AFIALGNFCR SPMAEAIFKH EVEKANLENR FNKIDSFGTS NYHVGESPDH  60
   61 RTVSICKQHG VKINHKGKQI KTKHFDEYDY IIGMDESNIN NLKKIQPEGS KAKVCLFGDW 120
  121 NTNDGTVQTI IEDPWYGDIQ DFEYNFKQIT YFSKQFLKKE L

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. CDD1 SUS1 gi|14277743, gi|... gi|7245349, gi|7...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] PSI-BLAST 45.30103 Tyrosine phosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoprotein phosphatase activity
    		•  6.88246946508693 bayes_pls_golite062009
  • phosphatase activity
    		•  6.45415826301085 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  6.24793868976995 bayes_pls_golite062009
  • protein tyrosine phosphatase activity
    		•  5.42677419561083 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  5.27901564747165 bayes_pls_golite062009
  • hydrolase activity
    		•  3.65742648154352 bayes_pls_golite062009
  • catalytic activity
    		•  1.99182579317454 bayes_pls_golite062009
  • binding
    		•  1.7522117458664 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.628751319213679 bayes_pls_golite062009
  • acid phosphatase activity
    		•  0.62303289859123 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.557666750724006 bayes_pls_golite062009
  • DNA binding
    		•  0.357202336581626 bayes_pls_golite062009
  • protein binding
    		•  0.332591807861153 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle