Protein Overview: gi|5542337, gi|2...

General Information:
Name(s) found:	gi\|5542339 [NCBI NR] gi\|5542338 [NCBI NR] gi\|5542337 [NCBI NR] gi\|219109404 [NCBI NR] gi\|219109403 [NCBI NR] gi\|219109402 [NCBI NR] gi\|219109398 [NCBI NR] gi\|219109397 [NCBI NR] gi\|219109396 [NCBI NR] gi\|219109392 [NCBI NR] gi\|219109391 [NCBI NR] gi\|219109390 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|5542339\|pdb\|1QBJ\|C Chain C, Crystal Structure Of The Zalpha Z-Dna Complex [NCBI NR] gi\|5542338\|pdb\|1QBJ\|B Chain B, Crystal Structure Of The Zalpha Z-Dna Complex [NCBI NR] gi\|5542337\|pdb\|1QBJ\|A Chain A, Crystal Structure Of The Zalpha Z-Dna Complex [NCBI NR] gi\|219109404\|pdb\|3F23\|C Chain C, Crystal Structure Of Zalpha In Complex With D(Cggccg) [NCBI NR] gi\|219109403\|pdb\|3F23\|B Chain B, Crystal Structure Of Zalpha In Complex With D(Cggccg) [NCBI NR] gi\|219109402\|pdb\|3F23\|A Chain A, Crystal Structure Of Zalpha In Complex With D(Cggccg) [NCBI NR] gi\|219109398\|pdb\|3F22\|C Chain C, Crystal Structure Of Zalpha In Complex With D(Cgtacg) [NCBI NR] gi\|219109397\|pdb\|3F22\|B Chain B, Crystal Structure Of Zalpha In Complex With D(Cgtacg) [NCBI NR] gi\|219109396\|pdb\|3F22\|A Chain A, Crystal Structure Of Zalpha In Complex With D(Cgtacg) [NCBI NR] gi\|219109392\|pdb\|3F21\|C Chain C, Crystal Structure Of Zalpha In Complex With D(Cacgtg) [NCBI NR] gi\|219109391\|pdb\|3F21\|B Chain B, Crystal Structure Of Zalpha In Complex With D(Cacgtg) [NCBI NR] gi\|219109390\|pdb\|3F21\|A Chain A, Crystal Structure Of Zalpha In Complex With D(Cacgtg) [NCBI NR] Chain C, Crystal Structure Of The Zalpha Z-Dna Complexgi\|5542338\|pdb\|1QBJ\|B Chain B, Crystal Structure Of The Zalpha Z-Dna Complexgi\|5542337\|pdb\|1QBJ\|A Chain A, Crystal Structure Of The Zalpha Z-Dna Complex [nrdb_11152004_Chlamydomonas] Chain C, Crystal Structure Of The Zalpha Z-Dna Complex [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta] Chain B, Crystal Structure Of The Zalpha Z-Dna Complex [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta] Chain A, Crystal Structure Of The Zalpha Z-Dna Complex [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
Organism:	Homo sapiens
Length:	81 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 GSHMLSIYQD QEQRILKFLE ELGEGKATTA HDLSGKLGTP KKEINRVLYS LAKKGKLQKE 60 61 AGTPPLWKIA VSTQAWNQHS G

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Noble WS, et al. (2009) Manuscript in preparation.		gi\|112491310 gi\|219109210, gi... gi\|5542337, gi\|2... gi\|56554577

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..81]	PSI-BLAST	29.154902	Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
binding	0.835523092977445	bayes_pls_golite062009
transcription regulator activity	0.4843036104266	bayes_pls_golite062009
nucleic acid binding	0.37117756729668	bayes_pls_golite062009
DNA binding	0.3118855114645	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle