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View Structure Prediction Details

Protein: gi|5542337, gi|2...
Organism: Homo sapiens
Length: 81 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5542337, gi|2....

Description E-value Query
Range
Subject
Range
gi|34364836 - gi|34364836|emb|CAE45853.1| hypothetical protein [Homo sapiens]
124.0 [0..2] [81..159]
gi|114559920 - gi|114559920|ref|XP_513841.2| PREDICTED: adenosine deaminase, RNA-specific [Pan troglodytes]
124.0 [0..2] [81..137]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSHMLSIYQD QEQRILKFLE ELGEGKATTA HDLSGKLGTP KKEINRVLYS LAKKGKLQKE  60
   61 AGTPPLWKIA VSTQAWNQHS G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.154902
Match: 1qbjA
Description: Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.835523092977445 bayes_pls_golite062009
transcription regulator activity 0.4843036104266 bayes_pls_golite062009
nucleic acid binding 0.37117756729668 bayes_pls_golite062009
DNA binding 0.3118855114645 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle