YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|2098528, gi|2...

General Information:
Name(s) found: gi|2098528 [NCBI NR]
gi|2098527 [NCBI NR]
gi|2098526 [NCBI NR]
gi|2098525 [NCBI NR]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • gi|2098528|pdb|1CNT|4 Chain 4, Ciliary Neurotrophic Factor [NCBI NR]
  • gi|2098527|pdb|1CNT|3 Chain 3, Ciliary Neurotrophic Factor [NCBI NR]
  • gi|2098526|pdb|1CNT|2 Chain 2, Ciliary Neurotrophic Factor [NCBI NR]
  • gi|2098525|pdb|1CNT|1 Chain 1, Ciliary Neurotrophic Factor [NCBI NR]
    • Organism: Homo sapiens
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTEHSPLT PHRRDLCSRS IWLARKIRSD LTALTESYVK HQGLNKNINL DSADGMPVAS  60
   61 TDQWSELTEA ERLQENLQAY RTFHVLLARL LEDQQVHFTP TEGDFHQAIH TLLLQVAAFA 120
  121 YQIEELMILL EYKIPRNEAD GMPINVGDGG LFEKKLWGLK VLQELSQWTV RSIHDLRFIS 180
  181 SHQTGIP

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|2098528, gi|2... gi|219109210, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 62.522879 Ciliary neurotrophic factor (CNTF)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytokine receptor binding
    		•  6.47223189691244 bayes_pls_golite062009
  • receptor binding
    		•  5.3304255990112 bayes_pls_golite062009
  • cytokine activity
    		•  5.1883241815362 bayes_pls_golite062009
  • growth factor activity
    		•  4.92105782010612 bayes_pls_golite062009
  • protein binding
    		•  3.52041127390038 bayes_pls_golite062009
  • ciliary neurotrophic factor receptor binding
    		•  3.41894439248144 bayes_pls_golite062009
  • binding
    		•  3.38401550405066 bayes_pls_golite062009
  • growth hormone activity
    		•  2.60130826123596 bayes_pls_golite062009
  • hormone activity
    		•  2.52921243340076 bayes_pls_golite062009
  • prolactin receptor binding
    		•  2.45721634350294 bayes_pls_golite062009
  • interleukin-6 receptor binding
    		•  2.37535614986843 bayes_pls_golite062009
  • interleukin-27 binding
    		•  1.83998174953013 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.46377724038658 bayes_pls_golite062009
  • interleukin-10 receptor binding
    		•  1.27984955354659 bayes_pls_golite062009
  • erythropoietin receptor binding
    		•  0.77580300541347 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.470106824402923 bayes_pls_golite062009
  • signal transducer activity
    		•  0.470106824402923 bayes_pls_golite062009
  • interleukin-12 binding
    		•  0.32382333549078 bayes_pls_golite062009
  • catalytic activity
    		•  0.246169290135575 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle