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Protein Overview: gi|157829638, gi...

General Information:
Name(s) found: gi|3212250 [NCBI NR]
gi|157829638 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|3212250|pdb|1A17| Chain , Tetratricopeptide Repeats Of Protein Phosphatase 5 [NCBI NR]
  • gi|157829638|pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5 [NCBI NR]
    • Organism: Homo sapiens
    Length: 166 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDEPPADGAL KRAEELKTQA NDYFKAKDYE NAIKFYSQAI ELNPSNAIYY GNRSLAYLRT  60
   61 ECYGYALGDA TRAIELDKKY IKGYYRRAAS NMALGKFRAA LRDYETVVKV KPHDKDAKMK 120
  121 YQECNKIVKQ KAFERAIAGD EHKRSVVDSL DIESMTIEDE YSGPKL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|157829638, gi... gi|219109210, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] PSI-BLAST 23.69897 PP5 structure

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.71974493738804 bayes_pls_golite062009
  • protein binding
    		•  2.67835748923436 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.584434683111562 bayes_pls_golite062009
  • signal transducer activity
    		•  0.521231731916781 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.521231731916781 bayes_pls_golite062009
  • DNA binding
    		•  0.31557320489611 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29339620716015 bayes_pls_golite062009
  • protein phosphatase binding
    		•  0.15630746178007 bayes_pls_golite062009
  • phosphatase binding
    		•  0.0815080609207302 bayes_pls_golite062009
  • transcription activator activity
    		•  0.0417103037919364 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle