| Protein: | gi|1209535, gi|1... |
| Organism: | Mus musculus |
| Length: | 261 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1209535, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..9] | [260..104] |
|
|
308.0 | [0..7] | [260..102] |
|
|
307.0 | [0..9] | [260..104] |
|
Region A: Residues: [1-261] |
1 11 21 31 41 51
| | | | | |
1 MAALWLLLLV LSLHCMGAGG FVAHVESTCV LNDAGTPQDF TYCVSFNKDL LACWDPDVGK 60
61 IVPCEFGVLS RLAEIISNIL NEQESLIHRL QNGLQDCATH TQPFWDVLTH RTRAPSVRVA 120
121 QTTPFNTREP VMLACYVWGF YPADVTITWM KNGQLVPSHS NKEKTAQPNG DWTYQTVSYL 180
181 ALTPSYGDVY TCVVQHSGTS EPIRGDWTPG LSPIQTVKVS VSAATLGLGF IIFCVGFFRW 240
241 RKSHSSSYTP LPGSTYPEGR H
|
| Detection Method: |  |
| Confidence: | 39.0 |
| Match: | 1k8iB |
| Description: | Class II MHC beta chain, C-terminal domain; Class II MHC beta chain, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptide antigen binding | 11.0753660234769 | bayes_pls_golite062009 |
| olfactory receptor activity | 8.50611980376815 | bayes_pls_golite062009 |
| antigen binding | 7.67141746788228 | bayes_pls_golite062009 |
| lipid antigen binding | 4.82286265971588 | bayes_pls_golite062009 |
| endogenous lipid antigen binding | 4.69113685883551 | bayes_pls_golite062009 |
| receptor activity | 3.04238248088254 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.91649681515985 | bayes_pls_golite062009 |
| MHC class I receptor activity | 2.8317290648207 | bayes_pls_golite062009 |
| molecular transducer activity | 2.59970257426838 | bayes_pls_golite062009 |
| signal transducer activity | 2.59970257426838 | bayes_pls_golite062009 |
| IgG binding | 2.59905791929203 | bayes_pls_golite062009 |
| natural killer cell lectin-like receptor binding | 2.3496397305448 | bayes_pls_golite062009 |
| protein binding | 2.20481087437436 | bayes_pls_golite062009 |
| binding | 2.11682283742138 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 1.37360564853216 | bayes_pls_golite062009 |
| growth factor binding | 1.1520564031101 | bayes_pls_golite062009 |
| IgG receptor activity | 1.15013317153047 | bayes_pls_golite062009 |
| receptor binding | 0.96769592478452 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 0.962566971314929 | bayes_pls_golite062009 |
| exogenous lipid antigen binding | 0.763929387638141 | bayes_pls_golite062009 |
| coreceptor activity | 0.661209696849389 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.4860421936 | bayes_pls_golite062009 |
| MHC class II receptor activity | 0.251167772391909 | bayes_pls_golite062009 |
| peptide binding | 0.2334349814724 | bayes_pls_golite062009 |
| hydrolase activity | 0.206657304371779 | bayes_pls_golite062009 |
| catalytic activity | 0.115804452291889 | bayes_pls_golite062009 |
