| Protein: | rnh1-PB |
| Organism: | Drosophila melanogaster |
| Length: | 314 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rnh1-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..26] | [308..878] |
|
Region A: Residues: [1-314] |
1 11 21 31 41 51
| | | | | |
1 MLLPRYFCWN LQRCTMAFYA VASGRRSGVY GSWAECEEQV KGFKNAKYKK FKTRQEADQF 60
61 VNGCKSYAPQ DVAVPLGKEK ASLASWKNSI EVNKNPKYTD EWPEEDHDLA EDDLPDILNR 120
121 KRKGTTSGDK RNKIPRHASQ VSEATGLKQV GAFQFEIDAE GYVIVYTDGS CIGNGRAGAC 180
181 AGYGVYFGKN HQLNAAKPVE GRVTNNVGEI QAAIHAIKTA LDLGIQKLCI STDSQFLINS 240
241 ITLWVAGWKK RDWKLKNNQP VKNVVDFKEL DKLLQENNIT VKWNYVEAHK GIEGNEMADK 300
301 LARQGSALYK QKNG
|
| Detection Method: |  |
| Confidence: | 60.69897 |
| Match: | 1jkhA |
| Description: | HIV RNase H (Domain of reverse transcriptase); HIV-1 reverse transcriptase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 4.81599779544001 | bayes_pls_golite062009 |
| exoribonuclease activity | 3.01417328311605 | bayes_pls_golite062009 |
| ribonuclease H activity | 2.91966688044755 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 2.89077854960958 | bayes_pls_golite062009 |
| exonuclease activity | 2.69024175413643 | bayes_pls_golite062009 |
| nuclease activity | 2.65398446409354 | bayes_pls_golite062009 |
| endonuclease activity | 2.63074055051349 | bayes_pls_golite062009 |
| endoribonuclease activity | 2.59247838057313 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.57498413015114 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 2.49957333962564 | bayes_pls_golite062009 |
| hydrolase activity | 2.41899414621161 | bayes_pls_golite062009 |
| DNA polymerase activity | 1.82615627615268 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 1.68530265026203 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.61250137150057 | bayes_pls_golite062009 |
| catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
| binding | 1.20709976964365 | bayes_pls_golite062009 |
| nucleic acid binding | 1.12235348738959 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.1219517187744 | bayes_pls_golite062009 |
| transcription regulator activity | 1.10433412699603 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.86862629020506 | bayes_pls_golite062009 |
| DNA binding | 0.710663468386339 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 0.708753843279937 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.623018247078448 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.598360955770972 | bayes_pls_golite062009 |
| transcription factor activity | 0.332903382446869 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.278838342302102 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.261428436029202 | bayes_pls_golite062009 |
| protein binding | 0.242714557118293 | bayes_pls_golite062009 |
