| Protein: | lola-PK |
| Organism: | Drosophila melanogaster |
| Length: | 546 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lola-PK.
| Description | E-value | Query Range |
Subject Range |
|
|
642.0 | [0..48] | [546..2388] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MDDDQQFCLR WNNHQSTLIS VFDTLLENET LVDCTLAAEG KFLKAHKVVL SACSPYFATL 60
61 LQEQYDKHPI FILKDVKYQE LRAMMDYMYR GEVNISQDQL AALLKAAESL QIKGLSDNRT 120
121 GGGVAPKPES SGHHRGGK
|
| Detection Method: |  |
| Confidence: | 13.522879 |
| Match: | 2ihcA |
| Description: | No description for 2ihcA was found. |
|
Region A: Residues: [139-229] |
1 11 21 31 41 51
| | | | | |
1 LSGAYTLEQT KRARLATGGA MDTSGDVSGS REGSSSPSRR RRKVRRRSME NDAHDNSNSS 60
61 VLQAAASNQS ILQQTGAGLA VSALVTTQLS S
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| nucleic acid binding | 4.58713908116892 | bayes_pls_golite062009 |
| DNA binding | 4.56219307357342 | bayes_pls_golite062009 |
| transcription activator activity | 3.52873291636993 | bayes_pls_golite062009 |
| transcription factor activity | 3.50954949535763 | bayes_pls_golite062009 |
| transcription repressor activity | 3.27542149084008 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.22082323675675 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.53101891154822 | bayes_pls_golite062009 |
| chromatin binding | 2.18464662431232 | bayes_pls_golite062009 |
| protein binding | 2.05530362750351 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.63161912031789 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.34049786451995 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
|
Region A: Residues: [230-416] |
1 11 21 31 41 51
| | | | | |
1 GPAAGTSSQA SSTQQQQPLT STNVTKKTES AKLTSSTAAP ASGASASAAV QQAHLHQQQA 60
61 QTTSDAINTE NVQAQSQGGA QGVQGDDEDI DEGSAVGGPN SATGPNPASA SASAVHAGVV 120
121 VKQLASVVDK SSSNHKHKIK DNSVSSVGSE MVIEPKAEYD DDAHDENVED LTLDEEDMTM 180
181 EELDQTA
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [417-546] |
1 11 21 31 41 51
| | | | | |
1 GTSQGGEGSS QTYATWQHDR SQDELGLMAQ DAQQRDPQDF VLTWYQHACD QCGKSYKTRK 60
61 SLSRHRRFEC RFTTERPIFQ CPSCNYAAKR SDNLTKHIKT HFAKMKKDFL PLAFQMQAST 120
121 GIATKWEATA
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1a1fA |
| Description: | ZIF268 |
Matching Structure (courtesy of the PDB): |
|
