| Protein: | gi|119596571, gi... |
| Organism: | Homo sapiens |
| Length: | 373 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119596571, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-51 | [3..365] | [18..395] |
|
|
1.0E-50 | [3..365] | [18..385] |
|
|
2.0E-50 | [3..365] | [18..385] |
|
|
2.0E-50 | [3..365] | [18..385] |
|
|
3.0E-50 | [3..365] | [18..385] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MQLAARIRPR DLEEFFSTVG KVRDVRMISD RNSRRSKGIA YVEFVDVSSV PLAIGLTGQR 60
61 VLGVPIIVQA SQAEKNRAAA MANNLQ
|
| Detection Method: |  |
| Confidence: | 4.82 |
| Match: | 2dgsA |
| Description: | No description for 2dgsA was found. |
|
Region A: Residues: [87-176] |
1 11 21 31 41 51
| | | | | |
1 KGSAGPMRLY VGSLHFNITE DMLRGIFEPF GRIESIQLMM DSETGRSKGY GFITFSDSEC 60
61 AKKALEQLNG FELAGRPMKV GHVTERTDAS
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 2jrsA |
| Description: | No description for 2jrsA was found. |
|
Region A: Residues: [177-239] |
1 11 21 31 41 51
| | | | | |
1 SASSFLDSDE LERTGIDLGT TGRLQLMARL AEGTGLQIPP AAQQALQMSG SLAFGAVAEF 60
61 SFV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [240-373] |
1 11 21 31 41 51
| | | | | |
1 IDLQTRLSQQ TEASALAAAA SVQPLATQCF QLSNMFNPQT EEEVGWDTEI KDDVIEECNK 60
61 HGGVIHIYVD KNSAQGNVYV KCPSIAAAIA AVNALHGRWF AGKMITAAYV PLPTYHNLFP 120
121 DSMTATQLLV PSRR
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 2ditA |
| Description: | No description for 2ditA was found. |
| Term | Confidence | Notes |
| RNA binding | 6.73097473547076 | bayes_pls_golite062009 |
| 6.62953239642182 | bayes_pls_golite062009 | |
| mRNA binding | 5.29759606920196 | bayes_pls_golite062009 |
| nucleic acid binding | 4.92126426323641 | bayes_pls_golite062009 |
| binding | 3.64400841800969 | bayes_pls_golite062009 |
| snRNA binding | 3.28448936696877 | bayes_pls_golite062009 |
| poly-pyrimidine tract binding | 3.11990160533699 | bayes_pls_golite062009 |
| single-stranded RNA binding | 2.93798024346416 | bayes_pls_golite062009 |
| U1 snRNA binding | 2.26303528058407 | bayes_pls_golite062009 |
| transcription regulator activity | 1.92450390013691 | bayes_pls_golite062009 |
| DNA binding | 1.8021593476478 | bayes_pls_golite062009 |
| structural molecule activity | 1.29928829870122 | bayes_pls_golite062009 |
| transcription factor activity | 1.15127506309683 | bayes_pls_golite062009 |
| protein binding | 1.12215421354121 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.591700155096213 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.383589644462932 | bayes_pls_golite062009 |
