| Protein: | grk-PA |
| Organism: | Drosophila melanogaster |
| Length: | 295 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grk-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
199.0 | [0..2] | [295..1] |
|
|
160.0 | [0..45] | [282..3958] |
|
|
158.0 | [0..45] | [282..3955] |
|
|
152.0 | [0..100] | [283..4009] |
|
|
151.0 | [0..63] | [267..3980] |
|
|
147.0 | [0..100] | [282..3993] |
|
|
138.0 | [0..68] | [295..1668] |
|
|
133.0 | [0..68] | [295..2402] |
|
Region A: Residues: [1-295] |
1 11 21 31 41 51
| | | | | |
1 MMQIPFTRIF KVIFVLSTIV AVTDCCSSRI LLLREHTLKI VQHQHSHMHE HAHELQQQIQ 60
61 ETAVELLNRL ELQRKQLEAS AQEEADQLHP DTDPNPDSGG QLPNADDSIA ADPEQDGIIL 120
121 GSSTDTWLAS ESSTPITDSE TVTTPETVTH TGEPPPDPSS SSTPDSTTPS PNDKETEIQM 180
181 LPCSEAYNTS FCLNGGHCFQ HPMVNNTVFH SCLCVNDYDG ERCAYKSWNG DYIYSPPTAQ 240
241 RKVRMAHIVF SFPVLLMLSS LYVLFAAVFM LRNVPDYRRK QQQLHLHKQR FFVRC
|
| Detection Method: |  |
| Confidence: | 4.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 4.60755835611133 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 4.4860322783685 | bayes_pls_golite062009 |
| growth factor activity | 4.38305031783896 | bayes_pls_golite062009 |
| binding | 2.54996368217395 | bayes_pls_golite062009 |
| heparin binding | 2.49012176521764 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.44185509650703 | bayes_pls_golite062009 |
| polysaccharide binding | 2.16901652361989 | bayes_pls_golite062009 |
| protein binding | 1.97546801934296 | bayes_pls_golite062009 |
| pattern binding | 1.92168039086846 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 1.42853255302174 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 1.17748426017837 | bayes_pls_golite062009 |
| transcription regulator activity | 0.724489340907325 | bayes_pls_golite062009 |
| transcription factor binding | 0.62178723762474 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.50737750327034 | bayes_pls_golite062009 |
