| Protein: | GIT1 |
| Organism: | Homo sapiens |
| Length: | 761 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..761] | [332..1101] |
|
|
0.0 | [1..761] | [1..761] |
|
|
0.0 | [1..761] | [1..761] |
|
|
0.0 | [5..761] | [14..779] |
|
|
0.0 | [17..761] | [16..769] |
|
|
0.0 | [17..761] | [52..805] |
|
|
0.0 | [1..761] | [1..770] |
|
|
0.0 | [9..761] | [9..740] |
|
Region A: Residues: [1-472] |
1 11 21 31 41 51
| | | | | |
1 MSRKGPRAEV CADCSAPDPG WASISRGVLV CDECCSVHRS LGRHISIVKH LRHSAWPPTL 60
61 LQMVHTLASN GANSIWEHSL LDPAQVQSGR RKANPQDKVH PIKSEFIRAK YQMLAFVHKL 120
121 PCRDDDGVTA KDLSKQLHSS VRTGNLETCL RLLSLGAQAN FFHPEKGTTP LHVAAKAGQT 180
181 LQAELLVVYG ADPGSPDVNG RTPIDYARQA GHHELAERLV ECQYELTDRL AFYLCGRKPD 240
241 HKNGHYIIPQ MADSLDLSEL AKAAKKKLQA LSNRLFEELA MDVYDEVDRR ENDAVWLATQ 300
301 NHSTLVTERS AVPFLPVNPE YSATRNQGRQ KLARFNAREF ATLIIDILSE AKRRQQGKSL 360
361 SSPTDNLELS LRSQSDLDDQ HDYDSVASDE DTDQEPLRST GATRSNRARS MDSSDLSDGA 420
421 VTLQEYLELK KALATSEAKV QQLMKVNSSL SDELRRLQRE IHKLQAENLQ LR
|
| Detection Method: |  |
| Confidence: | 50.522879 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.60916417202222 | bayes_pls_golite062009 |
| protein binding | 1.64872738860757 | bayes_pls_golite062009 |
| signal transducer activity | 1.2375987667709 | bayes_pls_golite062009 |
| molecular transducer activity | 1.2375987667709 | bayes_pls_golite062009 |
| receptor activity | 1.22857731988464 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.10325771560525 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.708360875374323 | bayes_pls_golite062009 |
| transcription regulator activity | 0.589753112911856 | bayes_pls_golite062009 |
| peptide binding | 0.215454111067296 | bayes_pls_golite062009 |
| nucleic acid binding | 0.156667528524505 | bayes_pls_golite062009 |
| DNA binding | 0.139886855398905 | bayes_pls_golite062009 |
| transcription factor binding | 0.11440400380364 | bayes_pls_golite062009 |
| receptor binding | 0.11089495579447 | bayes_pls_golite062009 |
|
Region A: Residues: [473-639] |
1 11 21 31 41 51
| | | | | |
1 QPPGPVPTPP LPSERAEHTP MAPGGSTHRR DRQAFSMYEP GSALKPFGGP PGDELTTRLQ 60
61 PFHSTELEDD AIYSVHVPAG LYRIRKGVSA SAVPFTPSSP LLSCSQEGSR HTSKLSRHGS 120
121 GADSDYENTQ SGDPLLGLEG KRFLELGKEE DFHPELESLD GDLDPGL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [640-761] |
1 11 21 31 41 51
| | | | | |
1 PSTEDVILKT EQVTKNIQEL LRAAQEFKHD SFVPCSEKIH LAVTEMASLF PKRPALEPVR 60
61 SSLRLLNASA YRLQSECRKT VPPEPGAPVD FQLLTQQVIQ CAYDIAKAAK QLVTITTREK 120
121 KQ
|
| Detection Method: | |
| Confidence: | 1.07 |
| Match: | 1k04A |
| Description: | FAT domain of focal adhesion kinase |
Matching Structure (courtesy of the PDB): |
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