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View Structure Prediction Details

Protein: ATPE_ECOLI
Organism: Escherichia coli
Length: 138 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATPE_ECOLI.

Description E-value Query
Range		 Subject
Range
ATPE_SPIOL - ATP synthase epsilon chain, chloroplastic OS=Spinacia oleracea GN=atpE PE=1 SV=1
 166.0 [0..2] [135..1]
ATPE_JASNU - ATP synthase epsilon chain, chloroplastic OS=Jasminum nudiflorum GN=atpE PE=3 SV=1
 166.0 [0..2] [135..1]
ATPE_SOYBN - ATP synthase epsilon chain, chloroplastic OS=Glycine max GN=atpE PE=3 SV=1
 165.0 [0..2] [135..1]
gi|110456644 - gi|110456644|gb|ABG74763.1| ATPase epsilon subunit [Jasminum leratii]
 165.0 [0..2] [135..1]
gi|110456681 - gi|110456681|gb|ABG74790.1| ATPase epsilon subunit [Jasminum abyssinicum]
 164.0 [0..2] [135..1]
ATPE_MORIN - ATP synthase epsilon chain, chloroplastic OS=Morus indica GN=atpE PE=3 SV=1
 164.0 [0..2] [135..1]
gi|69215466, gi|... - gi|85540810|gb|ABC70762.1| ATP synthase CF1 epsilon subunit [Ranunculus macranthus], gi|69215466|gb|...
 163.0 [0..2] [134..1]
gi|110456713 - gi|110456713|gb|ABG74816.1| ATPase epsilon subunit [Jasminum subhumile]
 163.0 [0..2] [135..1]
ATPE_NYMAL - ATP synthase epsilon chain, chloroplastic OS=Nymphaea alba GN=atpE PE=3 SV=1
 163.0 [0..2] [135..1]
ATPE_PIPCE - ATP synthase epsilon chain, chloroplastic OS=Piper cenocladum GN=atpE PE=3 SV=1
 163.0 [0..2] [135..1]

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Predicted Domain #1
Region A:
Residues: [1-138] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AMTYHLDVVS AEQQMFSGLV EKIQVTGSEG ELGIYPGHAP LLTAIKPGMI RIVKQHGHEE  60
   61 FIYLSGGILE VQPGNVTVLA DTAIRGQDLD EARAMEAKRK AEEHISSSHG DVDYAQASAE 120
  121 LAKAIAQLRV IELTKKAM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.0
Match: 1bshA
Description: Epsilon subunit of F1F0-ATP synthase C-terminal domain; Epsilon subunit of F1F0-ATP synthase N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transporting ATP synthase activity, rotational mechanism 15.1720697754538 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 13.6529705629238 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 11.9026865749616 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 10.7877912738726 bayes_pls_golite062009
cation transmembrane transporter activity 7.04576606325732 bayes_pls_golite062009
ion transmembrane transporter activity 6.93719537711825 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 6.50602203414328 bayes_pls_golite062009
transporter activity 4.8547700902431 bayes_pls_golite062009
substrate-specific transporter activity 4.63538407963677 bayes_pls_golite062009
proton-transporting ATPase activity, rotational mechanism 4.62830792765529 bayes_pls_golite062009
hydrogen-exporting ATPase activity, phosphorylative mechanism 4.61670151363313 bayes_pls_golite062009
transmembrane transporter activity 4.61435843335343 bayes_pls_golite062009
cation-transporting ATPase activity 2.69852213608942 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 1.4827138122635 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.855628009778066 bayes_pls_golite062009
pyrophosphatase activity 0.794161773208528 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.778506103358595 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.776107953088367 bayes_pls_golite062009
ATPase activity 0.742244064108415 bayes_pls_golite062009
binding 0.722114655317395 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism 0.687044063077645 bayes_pls_golite062009
primary active transmembrane transporter activity 0.631168739658504 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 0.624478110809949 bayes_pls_golite062009
active transmembrane transporter activity 0.606481520159459 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 0.594302421859398 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 0.590777866773001 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 0.590773381625548 bayes_pls_golite062009
ATPase activity, coupled 0.18018208923602 bayes_pls_golite062009
protein binding 0.0680638759907405 bayes_pls_golite062009
catalytic activity 0.0571176024160711 bayes_pls_golite062009
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