| Protein: | CE36953 |
| Organism: | Caenorhabditis elegans |
| Length: | 626 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36953.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..5] | [393..1] |
|
Region A: Residues: [1-462] |
1 11 21 31 41 51
| | | | | |
1 MRFVMWMWLF VVWITVLFGV SNGGILDRSC GRRRVGYITS WGKHPFRDDQ AEKLTHLVFA 60
61 FFVVDSDGSV KLEGDAAKAR LEHVKEVASR HPDLKLLYAV GGWENSQYFS VLTADHSRRS 120
121 ILISNFVKVI KEYGFDGVDI DWEYPVTGGA VEGTPADRRN YVNLMRELRN ELRDLESETG 180
181 KSYLISFAGA AGHWVLKPGY DLQQLMKYCD FVNVMSYDYF GAWASKWGAY TGPPAPLQFA 240
241 MPKKFSGRMN VHATMKDYSC QIKATDKINM GVPFYGRFWK NVGDAVDSTD DMWRTATATN 300
301 SEGTKFEGGD VQWRDLHEKF DTTKTKFHSG SKTPFIWLSE QKTFVGYENA ESLKHKVDYI 360
361 VENNIGGVMI WAIDFDDDQG TLLNSAAAES ICTTSTKSFN YKCSPVDDKR WWTYDDNEEL 420
421 AGMCGKSSPL IDGYYPVCDP DDPGHACCGK YGYCGSGAEF CS
|
| Detection Method: |  |
| Confidence: | 83.39794 |
| Match: | 1wawA |
| Description: | Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| chitinase activity | 6.40555694403866 | bayes_pls_golite062009 |
| imaginal disc growth factor activity | 3.9608908661313 | bayes_pls_golite062009 |
| growth factor activity | 2.18932950777991 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 1.91170236789651 | bayes_pls_golite062009 |
| receptor binding | 1.89435893935497 | bayes_pls_golite062009 |
| amylase activity | 1.38959979746158 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 1.34796838721403 | bayes_pls_golite062009 |
| chitin binding | 1.29046765706168 | bayes_pls_golite062009 |
| binding | 1.1885466730171 | bayes_pls_golite062009 |
| carbohydrate binding | 0.80333288291596 | bayes_pls_golite062009 |
| glucosidase activity | 0.766503513427695 | bayes_pls_golite062009 |
| protein binding | 0.690517649847952 | bayes_pls_golite062009 |
| catalytic activity | 0.534516847146079 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.266938437560648 | bayes_pls_golite062009 |
| hexosaminidase activity | 0.21148675734804 | bayes_pls_golite062009 |
| hydrolase activity | 0.178746202646272 | bayes_pls_golite062009 |
| pattern binding | 0.113396113487931 | bayes_pls_golite062009 |
|
Region A: Residues: [463-626] |
1 11 21 31 41 51
| | | | | |
1 CPECIDYGAD PNLILKEPVK PSQKITWYTS DAGEGKRGRC GRDVPPLEGE APTCNPDDAN 60
61 AHCCSNGGYC GNSKEHCECN GCIDFAKQRD FKYKPLEWWT FSENPANVGR CGYNAPRLST 120
121 GKIPKCDPDS ESYCCSNSGY CGKGEQYCSC LGCADFKANP AFEY
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 3.70076684537777 | bayes_pls_golite062009 |
| growth factor activity | 2.98754787930869 | bayes_pls_golite062009 |
| binding | 2.11319437256866 | bayes_pls_golite062009 |
| protein binding | 1.99839937208979 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.69932456942774 | bayes_pls_golite062009 |
| heparin binding | 1.31822233987881 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 1.28588198220215 | bayes_pls_golite062009 |
| pattern binding | 1.26957983931218 | bayes_pls_golite062009 |
| polysaccharide binding | 1.11978732751628 | bayes_pls_golite062009 |
| carbohydrate binding | 0.72748768329894 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 0.6530199085873 | bayes_pls_golite062009 |
| transcription factor binding | 0.25674871945811 | bayes_pls_golite062009 |
| transcription regulator activity | 0.217489473629515 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.18562100414853 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.0190385772244036 | bayes_pls_golite062009 |
